LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere05g2571	ATGGTACCTTCGGGGCCACCCCATCCAATTGGTGGTGCCCAGTCTGTCTCACCCTCCCTTCTGAGATCAAATTCTGGAATAATGGGAGCTCAAGGGGGTCCTGTGTCTTCCCAGACTTCTTTCTCTTCACTTGTGTCACCTCGTACTCAATTTAACAACATGAATATGCTAGGCAATATTTCAAATGTATCTTCCATACTGAATCAATCTCTCCCAAGCAGTGTTCCCAATTCTGGGCTCTCTGGTCCTGGGACTAGTCAGTGTGGAGCAGTTGATCCTGGAGCTGGAACTGATCCACTTTCCTGTGTTGGCAATGGAATGAGTTTCAATAATACTTCATCCTTGTTTATACAATCAAATATGGTGAGCCCTGGTTCATCTTGTCAAGGTCAGGGTCAACAATTTTCAAATCCTTCTGGTAATCAGCTGTTGCAGGAACAACAGCATTCCCAACCACTTGAATCTCACAACTTCCAACATAATCAGCAGGCAATGCAACAGTTCTCTGCTCCTCTCAATAATCAGCAACAACAGCAGCAACATTTTCAATCTATTCGAGGAGGATTAGGTGGCGTTGGACCAGTAAAGTTGGAGCCCCAGGTGAACAACAATCAAATTGGACAGCAGCAGCAGCAACAGCAGTTGCAATCTTTGAGGAATCTTGCTCCAGTGAAATTGGAGCCGCAGCAAATTCAAACAATGAGAAGTTTGGCACCGGTAAAAATGGAACCCCAGCATTCTGATCAGCCATTATTCTTGCATCAACAGCAACAGCAACAGCAACAGCAACCATCGCAGCAGCAACTGCAGCAGCAGCAACAACAACAATTCCTCCAAATGTCAAGGCAATCCTCTCATGCTGCTGCTGCTCATATGAATCTGTTGCACCAACAGAGACTGATGCAAATACAACAACACCACCAGCAACAAATCTTAAAGGCAATGCCTCAACAACGGTCTCAACTACAACAGCAGTTTCAACAGCAGAATATGCCTTTAAGGTCTCCTGCGAAGCCAGTATATGAACCTGGAATGTGTGCTAGGCGGCTAACACATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAATATTGAGTTTTGGAGGAAATTTGTTGCTGAATATTTTGCTCCTAATGCCAAGAAGAAGTGGTGTGTTTCAATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTTCCTCAGGATGTGTGGCACTGTGAAATTTGTAATCGCAAGCCTGGCCGTGGGTTTGAAGCAACTTTTGAGGTTCTTCCTAGACTTTTTAAAATAAAGTATGAAAGTGGGACTTTAGAAGAACTACTTTATGTTGACATGCCTCGAGAATATCATACTTCCTCTAGTCAGATTGTTCTGGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTACGTGACGGTCAGTTGCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAAGAGCTTATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGCTGCTCAAAAATACCAGGCTTTTACTCAAAATACAACACCTAAGTTATCTGTTCCGGAGATTCAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCCTTAGAAGTGCCTTTAGTTAATGATTTAGGATATACTAAGAGATATGTGCGTTGTCTTCAGATATCTGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGTCGAGAAACAGGGACTGGACCTATGGAGAGCTTGGCCAAATTCCCTCGGAAAACAAGTGGGTCACCTGGACTCCAAAGTCAAGCTCAACAGAATGAAGATAGATTACAGCAGCATCAACAACAGCAACAGCAAATGGTGGCCCATAACTCAAATGCCGATCAAAATATGGTGCAAGGTGCTGCCATGCAAATTGCTTCGAGCAATGGTGTGGCTGGTGTAAATACCCCTGTCACTTCAGCATCTACATCAACGACCACAAGCACCATTGCTGGACTTTTCCATCAGAACTCCATGAATTCTAGACAACAAAGTTCAATAACCAATGCTAACAGTCCATATGGAGGTACTGTTCAGATATCATCCCCAGGGTCTTCCAGTACTGCACCACAGGTACAAGCAAACCTGTCACCTTTTCAAGCACCAACACCTTCATCCAACAACCCCCCACAAACATCACGCTCTGCCTTAGCTGCTGCCAATCACATGAGTACAACAAACACACCAACTAATGTGTCCTTGGTCCAACAGCAGCCGCCTCTCTCTGGTGAGGTTGACCCTACTGATGCTCAGAGTTCAGTCCAGAAAATCATACATGACATGATGATGTCCAGCCAGATTAATGGCACAGCTGGAATCAGAAGGGTTGGTTCTCTTGGAAATGATGTAAAAAATGTAAATGGGATTCATCTAGCGAGCACCAATACAGGTCTCAACGGTGGGAACTGCCTAGTGGGCAACGGGGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGCGGATTTGGCACAATGGGTGGTGGACTTGGTCAATCTGCTTTGGTCAATGGAATCAGAGCTGCAATAGGAAATAATTCAGTTATGAATGGGAGGGGAGGAATGGCATCTATGGCTCGGGACCAAGCTATGAATCAACAGGATTTGTCGAACCAATTACTTAGTGGGCTGGGAGCAGTCAATGCTTTTAATAATCTTCAATTTGATTGGAAACCCTCCCCATGA	2772	0.4416	MVPSGPPHPIGGAQSVSPSLLRSNSGIMGAQGGPVSSQTSFSSLVSPRTQFNNMNMLGNISNVSSILNQSLPSSVPNSGLSGPGTSQCGAVDPGAGTDPLSCVGNGMSFNNTSSLFIQSNMVSPGSSCQGQGQQFSNPSGNQLLQEQQHSQPLESHNFQHNQQAMQQFSAPLNNQQQQQQHFQSIRGGLGGVGPVKLEPQVNNNQIGQQQQQQQLQSLRNLAPVKLEPQQIQTMRSLAPVKMEPQHSDQPLFLHQQQQQQQQQPSQQQLQQQQQQQFLQMSRQSSHAAAAHMNLLHQQRLMQIQQHHQQQILKAMPQQRSQLQQQFQQQNMPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHTSSSQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNTTPKLSVPEIQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRKTSGSPGLQSQAQQNEDRLQQHQQQQQQMVAHNSNADQNMVQGAAMQIASSNGVAGVNTPVTSASTSTTTSTIAGLFHQNSMNSRQQSSITNANSPYGGTVQISSPGSSSTAPQVQANLSPFQAPTPSSNNPPQTSRSALAAANHMSTTNTPTNVSLVQQQPPLSGEVDPTDAQSSVQKIIHDMMMSSQINGTAGIRRVGSLGNDVKNVNGIHLASTNTGLNGGNCLVGNGAVNSNSGVGVGGFGTMGGGLGQSALVNGIRAAIGNNSVMNGRGGMASMARDQAMNQQDLSNQLLSGLGAVNAFNNLQFDWKPSP	923

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere05g2571	923	PANTHER	LIM DOMAIN-BINDING PROTEIN	245	912	IPR029005	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	252	287	-	-
	Dere05g2571	923	Pfam	LIM-domain binding protein	349	603	IPR029005	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	16	41	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	307	340	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	1	41	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	170	199	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	690	780	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	170	185	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	122	154	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	307	334	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	596	641	-	-
	Dere05g2571	923	MobiDBLite	consensus disorder prediction	611	641	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere05g2571	Dere-ChrDere05	36255105	36263290	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere05g2571	1	919	C2H2 Transcription Factor Family	AT1G43850	60.189	0.0	757