Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2567 ATGAGTGAGGGAAGAAGCAGTGCAGCTCTAACTCTGGGGATCTGCGTGGCGCTACTATGCGTGTTGGTTGAGCTGGAAGGTGCGAATGCAGCAACTTACACAGTAGGAGGCCCTGGAGGTTGGACTTTCAAGACTGACACTTGGCCCAAAGGAAAGAGATTCAGAGCTGGTGATGTGCTAGTATTCAACTACGACGCGACGACACACAATGTGGTGGCGGTGGACAGAAGTGGGTACAGCCAGTGCAGTGCGCCGGGGGGGGCCAAAGTGTTAAGTTCTGGGAAGGACCAAATAAGGCTGGCACGAGGCCAGAACTACTTTATTTGCAGCACTCCTAGCCACTGCCAATCTGGGATGAAACTTGCCATTAATGCCGTGTGA 381 0.5302 MSEGRSSAALTLGICVALLCVLVELEGANAATYTVGGPGGWTFKTDTWPKGKRFRAGDVLVFNYDATTHNVVAVDRSGYSQCSAPGGAKVLSSGKDQIRLARGQNYFICSTPSHCQSGMKLAINAV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2567 126 CDD Plantacyanin 31 125 IPR041844 -
Dere05g2567 126 Gene3D - 31 126 IPR008972 -
Dere05g2567 126 FunFam basic blue protein-like 31 125 - -
Dere05g2567 126 Pfam Plastocyanin-like domain 41 119 IPR003245 GO:0009055
Dere05g2567 126 ProSitePatterns Type-1 copper (blue) proteins signature. 103 119 IPR028871 -
Dere05g2567 126 SUPERFAMILY Cupredoxins 31 125 IPR008972 -
Dere05g2567 126 ProSiteProfiles Phytocyanin domain profile. 31 126 IPR003245 GO:0009055
Dere05g2567 126 PANTHER BLUE COPPER PROTEIN 30 124 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2567 Dere-ChrDere05 36210606 36211072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2567 6 126 Phytocyanin Superfamily AT1G17800 41.860 8.08e-28 97.8