Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2562 ATGCCACGAACTGTCATTCCCTTCACTGTACTGTTCAGTCCAGAATTAATTGCTTTTCTGTTGGGGAGCGAGGCATCTTGTTGGCAGGTGAAATTAAATTTTCAAATGGCTAAAGTTTGTTGGCCTTATTTTGATCCTGAGTATGAGAACTTCAGCAACAGAATCAATCCTCCAAGGGTCTCGGTGGACAATGCTAGTTGTCATGACTGTACTCTTATCAAGGTTGATAGTGTTAACAAACCAGGAATTCTGCTGGAGGTTGTACAAATTCTAACCGACCTTGACTTGATAATCACCAAAGCTTATATATCTTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAGGGGAAGAAGATAACAGACAGCAAAACCATTGATTTCATCGAGAAGGCTCTAGGACCCAAGGGCCAGAGCAATGACGGGGTGAAGAGTTGGCCAGGAAAACGGGTTGGTGTGCACTCTGTTGGAGATCATACTGCCATTGAGCTCATTGGCAGAGACCGCCCAGGTCTCTTATCTGAGATCTCAGCTGTGCTTGCCAGCCTCCACATTAACGTGATTGCAGCTGAGGTTTGGACTCATAATAGGCGAATTGCATGTGTTCTTTATGTCAATGAAGCTACTAGTCGATCAGTGGATGCCCCTAACAGATTATCTCTCTTGGAGGAGCAACTCAACAATATCCTTCGTGGATGTGAAGATGATGAGAAAGTGGCTCGCACCAGCTTCTCCATGGGTTTCACCCATATGGATCGGCGGCTTCACCAAATGCTGTTTGCTGATCGCGATTATGAATGTGCTGTGGTGACGACAGACGTTGATTATCCTCCTTCTTTCAGGCCACAAATTACAATAGAGCGTTGTGAGGAAAAAGGTTACTCAGTGGTTAGTGTAAGGTGCAAAGATCGGGCCAAACTGATGTTCGACATTGTTTGCACTCTCACTGACATGCAATATGTTGTTTTCCATGCCACAATTTCATCAGATGCCCCTTATGCATCCCAGGAGTACTTTATCCGGCATATGGATGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCATCAAATGTATTGAAGCTGCTATTCAGAGAAGAGTAAGCGAGGGTGTAAGCCTTGAGCTGTGTGCAAAGGACAGAGTAGGTTTGCTATCTGAAGTGACCAGGATTCTACGAGAGAATGGGTTGACAGTTTGTAGAGCAGGTGTATCTACCATAGGGGAGCAAGCACTGAATGTGTTCTATGTGAGAGATGCTTCTGGAAATCCAGTGGACACACAGATAATTGAAGCACTTCGGAAAGAGATTGGGCAAACGATGATGATCAATGTGAAGAAGGTACCTGGGAATGCCAAAGCGCCTGAGAACCGAGGACGGGCCAAAACAAGCTTCTTCTTTGGGAATTTGTTGGAAAGGTTCTTGACTTGA 1446 0.4502 MPRTVIPFTVLFSPELIAFLLGSEASCWQVKLNFQMAKVCWPYFDPEYENFSNRINPPRVSVDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDLIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKGQSNDGVKSWPGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLASLHINVIAAEVWTHNRRIACVLYVNEATSRSVDAPNRLSLLEEQLNNILRGCEDDEKVARTSFSMGFTHMDRRLHQMLFADRDYECAVVTTDVDYPPSFRPQITIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTIGEQALNVFYVRDASGNPVDTQIIEALRKEIGQTMMINVKKVPGNAKAPENRGRAKTSFFFGNLLERFLT 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2562 481 CDD ACT_ACR_1 70 141 - -
Dere05g2562 481 FunFam ACT domain repeat 6 376 454 - -
Dere05g2562 481 Pfam ACT domain 165 234 IPR002912 -
Dere05g2562 481 Pfam ACT domain 72 120 IPR002912 -
Dere05g2562 481 Pfam ACT domain 378 441 IPR002912 -
Dere05g2562 481 SUPERFAMILY ACT-like 67 141 IPR045865 -
Dere05g2562 481 ProSiteProfiles ACT domain profile. 165 248 IPR002912 -
Dere05g2562 481 Gene3D - 373 453 - -
Dere05g2562 481 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 42 451 IPR040217 -
Dere05g2562 481 SUPERFAMILY ACT-like 374 444 IPR045865 -
Dere05g2562 481 ProSiteProfiles ACT domain profile. 378 455 IPR002912 -
Dere05g2562 481 SUPERFAMILY ACT-like 160 236 IPR045865 -
Dere05g2562 481 CDD ACT_ACR_4 376 447 - -
Dere05g2562 481 CDD ACT_ACR_3 298 372 - -
Dere05g2562 481 Gene3D - 163 245 - -
Dere05g2562 481 ProSiteProfiles ACT domain profile. 72 149 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2562 Dere-ChrDere05 36169220 36173398 Dispersed/Wgd