Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2529 ATGGGAAACCTGCGAGAGCAAGAGAGTACTGAAGCAGCTATCTCATCGAGCTCGAGGGTCGTAGGAGATGGTAGCAATCGTATAGAAGCCATCACTGTGACCCCATCTGACAACGTTCATGCTGCATATTCAAATAGCGAGGTCTCTTGCGATGAAATACAGAAACCTAGGTGGAGGAAGTTTCTATCCTATGTAGGTCCTGGTTTTCTGGTCTCCTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTGCAAGCTGGAGCTAACCACAGATATGAGCTGCTATGGGTGGTTCTTATTGGGCTATTCTTTGCACTCGTTATTCAATCATTGGCTGCAAATCTTGGCGTAACCACTGGCAAACACCTTTCAGAGTTATGCAAAGTGGAGTACCCACCTCTAGTAAAATACTGCTTGTGGTTGCTGGCTGAGGCTGCTGTCATAGCCGCAGATATACCTGAAGTGATTGGCACAGCTTTTGCGCTGAAAATACTGTTCAACATCCCTGTATGGGCAGGAGTTCTCTTGACTGGCTTCACCACTCTCTTGCTTCTTGGTCTCCAGAGATTTGGGGTTAGGAAGCTGGAACTGCTGATATCATTTCTAGTATTTGTAATGGCAGGATGTTTCTTTGGGGAAATAAGCTACGTAAAACCACCACCTTCTGACGTATTGAAGGGAATGTTTGTCCCAAAACTTAGTGGTCATGGAGCCACAGGAGACGCCATTGCCCTTCTCGGTGCTCTTGTCATGCCGCACAACCTCTTTCTTCACTCTGCTCTTGTGCTCTCTAGAAAAGTACCCAACTCTGTGCGTGGCATCAATGACGCGTGCAGATACTTCCTGATAGAGAGTGGGTTCGCTCTGTTTGTAGCATTTCTGATAAACGTTGCAGTAGTTTCAGTGTCAGGCACTGTATGCTCAACCAATAACCTTTCAGCTGAAGATACTGATAGATGCAGCAATCTCGCTCTTGATTCTGCTTCTTTCCTTCTCCAGAATGTCCTGGGAAGGTCCAGCTCAACCATTTATGCAATAGCATTGCTGGCCTCTGGACAAAGCTCTGCTATCACCGGCACCTATGCAGGGCAGTATATCATGCAGGGTTTTCTGGACCTCAGGATGAAAATGTGGATAAGGAACATGATGACGAGGTGCATTGCCATCATACCTAGTCTTATTGTCGCCATTATTGGAGGATCATCAGGAGCAGGCCGCCTTATTATAATTGCTTCGATGATACTTTCCTTTGAGCTTCCATTCGCTTTAATTCCACTACTCAAGTTTAGCAGCAGCAGTACCAAGATGGGACCTCACAAGAATTCTATGACTATCATTGTGATTTCATGGATCCTAGGCTTGGGAATCATTGGCATTAACGTGTACTACCTCAGCACAGGCTTTGTGGGTTGGTTAATTCATAACAGTCTTCCTAAGGTGGCAAATGTGTTCATCGGGATTATAGTGTTTCCTCTCATGGCCATTTACATTCTAGCCATTATCTACCTAACCTTCAGAAAAGACACTGTCAAGACAATTATACAGACAGAGATCGACCCTGTAGCGCAAACCCAGATGGAAAAGGGGCTCGCTAATGCTAATGAGCAATTAGAATTGGGTCAAGTTCCTTTTAGAGCAGATTTAATGGACATCCAACTTCAGGATTAG 1671 0.4524 MGNLREQESTEAAISSSSRVVGDGSNRIEAITVTPSDNVHAAYSNSEVSCDEIQKPRWRKFLSYVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLFFALVIQSLAANLGVTTGKHLSELCKVEYPPLVKYCLWLLAEAAVIAADIPEVIGTAFALKILFNIPVWAGVLLTGFTTLLLLGLQRFGVRKLELLISFLVFVMAGCFFGEISYVKPPPSDVLKGMFVPKLSGHGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGFALFVAFLINVAVVSVSGTVCSTNNLSAEDTDRCSNLALDSASFLLQNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLRMKMWIRNMMTRCIAIIPSLIVAIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMTIIVISWILGLGIIGINVYYLSTGFVGWLIHNSLPKVANVFIGIIVFPLMAIYILAIIYLTFRKDTVKTIIQTEIDPVAQTQMEKGLANANEQLELGQVPFRADLMDIQLQD 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2529 556 PRINTS Natural resistance-associated macrophage protein signature 168 187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 PRINTS Natural resistance-associated macrophage protein signature 381 398 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 PRINTS Natural resistance-associated macrophage protein signature 193 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 PRINTS Natural resistance-associated macrophage protein signature 413 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 PRINTS Natural resistance-associated macrophage protein signature 353 372 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 PRINTS Natural resistance-associated macrophage protein signature 140 166 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 PRINTS Natural resistance-associated macrophage protein signature 243 266 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 Pfam Natural resistance-associated macrophage protein 82 443 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 59 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 NCBIfam Nramp family divalent metal transporter 66 432 - -
Dere05g2529 556 MobiDBLite consensus disorder prediction 1 20 - -
Dere05g2529 556 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 53 515 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere05g2529 556 Hamap Divalent metal cation transporter MntH [mntH]. 44 469 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2529 Dere-ChrDere05 35818470 35822621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2529 54 546 Inorganic Solute Cotransporters AT1G15960 62.880 0.0 633