Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2525 ATGGCATCAGCAGCAGATCTACAGCTACCACCAGGCTTCAGATTCCATCCAACGGATGAGGAGCTCGTGATGCACTATCTCTGCCGTAAATGTGCATCACAGCATATCGCCGTTCCAATTATTGCCGAAATTGACCTTTACAAGTATGATCCATGGGACCTTCCGGGGATGGCCTTGTATGGGGAGAAGGAGTGGTACTTCTTCTCACCAAGAGACCGCAAATATCCGAACGGTTCGAGGCCGAACCGGGCAGCCGGGACGGGTTACTGGAAGGCCACCGGAGCGGATAAGCCCATCGGACAACCGAAACCGGTCGGGATCAAGAAAGCTTTGGTATTTTACGCAGGGAAAGCGCCCAAAGGAGAGAAAACCAATTGGATCATGCACGAGTATCGTCTCGCCGATGTGGATCGCTCCGCTCGCAAAAAGAACAGCCTAAGGCTCGATGACTGGGTGCTTTGCCGTATCTACAACAAGAAAGGCGCCATTGAGAAGCAGTCTAGTGCTTTCAGCCGGACAACTGAATCCTCCGACATCGAGGACAAGAAGCCGGAGAATTTGACACTTGGCGGAGCACTTCCGCCGCCGCCTCCGCCTTCTCAGGGTCCGGCGGCGATGACTGATTACATGTACTTTGACACGTCGGATTCAATCCCGAAGCTGCACACTGACTCGAGCTGTTCGGAGCAGGTGGTGTCGCCGGAGTTCGCGAGCGAGGTGCAGAGCGAACCCAAGTGGAATGAGTGGGAGAAGAACCTTGAGTTTCCATATAATTACGTGGATGCCACTCTGGGCAATAATAGCTTCGGGCCGCAGTTCCAGAGCGGTAATCAGATGTCGCCGTTGCAGGACATTTTCATGTACCTGCAGAAGCCCTTCTGA 882 0.5363 MASAADLQLPPGFRFHPTDEELVMHYLCRKCASQHIAVPIIAEIDLYKYDPWDLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQSSAFSRTTESSDIEDKKPENLTLGGALPPPPPPSQGPAAMTDYMYFDTSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKNLEFPYNYVDATLGNNSFGPQFQSGNQMSPLQDIFMYLQKPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2525 293 PANTHER NAC TRANSCRIPTION FACTOR 56 9 214 - -
Dere05g2525 293 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Dere05g2525 293 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Dere05g2525 293 MobiDBLite consensus disorder prediction 167 206 - -
Dere05g2525 293 FunFam NAC transcription factor 18 163 - -
Dere05g2525 293 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Dere05g2525 293 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2525 Dere-ChrDere05 35795010 35796539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2525 7 293 NAC Transcription Factor Family AT1G01720 72.973 2.67e-152 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere05g2525 NAM 4.6e-39 No_clan