Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2521 ATGGCAGAGTGTGTGTCAGTCACCATACTTTCATTGCCTTTACCATCCCAACCGTCTCCTACCAGAATGGCTGCTTTTGCTGGTGGTGCCGCCACCGTCTCTTCTCGCGTCATCTCCTCCGCTACCAGAGCCTCCCTCTCCCTTGCTTCTTCTTCTCGTTCACCTTCCTTCTTCTCTTCCTCATCCTCCTCTTGTCTTTCCTCGCTCAAATGCCTCGGATCCTCTCCTCGCATTTCTCTCCTCTTCCTCCATCAGCGAAGAGGTGACCTTCGTGTATCGAGTGGAGGATACTGCACTGTGCCTGCGCCGAAGTCATTTGCGTCTGATCCTGATCAATTGAGGAGCGCCAGGGAAGATATTAAGGAGCTTCTCAGGACTAAGTTCTGCCATCCATTATTGATTCGCTTGGGATGGCATGATGCTGGTACTTATGATAAGAATATTGAAGAGCCGCACAGAAGTGGAGCTAATGGTAGCTTAAGATTTGAAGTTGAACTAAAACATGCAGCCAATACTGGACTTGCAAATGCATTGAATCTTATTCAGCCAATCAAAGACAAATATTCCGGTGTTACATATGCAGACTTGTTTCAGTTGGCCAGTGCTACTGCTGTAGAGGAGGCTGGAGGCCCAAAAATCTCTATGAAGTATGGAAGAGTGGATGCCTCAGGGCCTGAACAATGCCCTGAAGAAGGGAGACTTCCTACTGCTGGGCCCCCTTCACCTGCTGATCATTTACGGCAAGTTTTCTACAGAATGGGATTTAATGACAAGGAAATAGTTGCATTATGTGGTGCGCACACAATGGGGCGGTCTCGACCAGACCGTAGTGGGTGGGGCAAGCCTGAGACCAAGTATACGAAAAATGGGCCAGGAGCACCTGGCGGGCAATCGTGGACAGTGCAGTGGTTGAAGTTTGACAATTCTTACTTCAAGGAAATCAGGGGGGGAAAGGATGAGGATCTATTGGTCTTGCCAACTGATGCTGCTCTGTTTGAGGATCCGTCATTCAAGGTCTATGCTGAAAAGTATGCTGCAGATGAGGAAGCATTCTTCAAAGATTATGCTGAGGCCCATGCCAAACTCAGCAACCTCGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATTGATGATGGACGTCCAAAAGCTTAA 1155 0.4857 MAECVSVTILSLPLPSQPSPTRMAAFAGGAATVSSRVISSATRASLSLASSSRSPSFFSSSSSSCLSSLKCLGSSPRISLLFLHQRRGDLRVSSGGYCTVPAPKSFASDPDQLRSAREDIKELLRTKFCHPLLIRLGWHDAGTYDKNIEEPHRSGANGSLRFEVELKHAANTGLANALNLIQPIKDKYSGVTYADLFQLASATAVEEAGGPKISMKYGRVDASGPEQCPEEGRLPTAGPPSPADHLRQVFYRMGFNDKEIVALCGAHTMGRSRPDRSGWGKPETKYTKNGPGAPGGQSWTVQWLKFDNSYFKEIRGGKDEDLLVLPTDAALFEDPSFKVYAEKYAADEEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDDGRPKA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2521 384 SUPERFAMILY Heme-dependent peroxidases 109 368 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 CDD ascorbate_peroxidase 105 370 - -
Dere05g2521 384 Pfam Peroxidase 117 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 116 238 - -
Dere05g2521 384 FunFam L-ascorbate peroxidase T, chloroplastic 237 360 - -
Dere05g2521 384 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Haem peroxidase superfamily signature 299 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Haem peroxidase superfamily signature 191 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Haem peroxidase superfamily signature 130 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Haem peroxidase superfamily signature 209 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Plant ascorbate peroxidase signature 109 129 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Plant ascorbate peroxidase signature 190 208 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Plant ascorbate peroxidase signature 328 352 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Plant ascorbate peroxidase signature 130 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 PRINTS Plant ascorbate peroxidase signature 209 221 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 MobiDBLite consensus disorder prediction 271 294 - -
Dere05g2521 384 Gene3D Peroxidase, domain 2 237 360 - -
Dere05g2521 384 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 99 369 IPR044831 GO:0004601|GO:0034599
Dere05g2521 384 ProSiteProfiles Plant heme peroxidase family profile. 133 384 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2521 384 Gene3D - 116 368 - -
Dere05g2521 384 MobiDBLite consensus disorder prediction 222 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2521 Dere-ChrDere05 35740698 35745280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2521 191 368 Peroxidase AT4G17690 32.474 2.04e-18 83.6