Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2518 ATGTGTGGTGATATACTCTACTGTGAGAGTGACCACATAACGCTCACTTCTTTAACCTTGAGAATGAAAATGGAGGTGGAACCAGATGTTGTGGATGCCACACAGCTCCAGAAGGATGAGGATCTGCACCATTTCCATGTCTTAGCTGTCGATGATAGCCTCCTCGACAGGAAACTTCTCGAAAGGCTCCTTCAAGTTTCTTCTTGCAAAGTGACTTGCGTGGATTCTGGGGACAAGGCTCTGAAATATCTGGGTCTGCTTGATGATCTTGATAATGCTTCTTCAACTTCTTCAGAATCATCGCCTTCTTCTCCTCTGTCACCTCAGCAAGAGGGAATGAAAGTGAACTTGATCATGACAGACTACTGCATGCCAGGGATGAGTGGCTATGATTTACTCAAACGAGTCAAGGGATCATCTTGGAAAGACGTACCGGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGTTTGGAAGGAGGGGCAGAGGAGTTTCTGGTGAAGCCACTCAAGTTATCAGATTTGAAGAAGCTTCAGCCGTACCTGGTGAGATCGCTGAAGAATAAGAATAGTAATAGTAAGAATAACAATAATTGTTGGGAACAAGAATCAGCTAAGAGTACCGTAGCAACCGACAATGACTGCAATAACAGTACTAACAGCAACAACACTTGTATCTCCAAAAGGAAGGCCCTCTCTCCTCAACCTTCCGACAGATCAAGACCCAAATTCAAAGGCCTTGCCGTGCTGTAA 765 0.4444 MCGDILYCESDHITLTSLTLRMKMEVEPDVVDATQLQKDEDLHHFHVLAVDDSLLDRKLLERLLQVSSCKVTCVDSGDKALKYLGLLDDLDNASSTSSESSPSSPLSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLVKPLKLSDLKKLQPYLVRSLKNKNSNSKNNNNCWEQESAKSTVATDNDCNNSTNSNNTCISKRKALSPQPSDRSRPKFKGLAVL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2518 254 PANTHER TWO-COMPONENT RESPONSE REGULATOR 45 217 IPR045279 GO:0009736
Dere05g2518 254 MobiDBLite consensus disorder prediction 215 254 - -
Dere05g2518 254 CDD REC_typeA_ARR 47 182 - -
Dere05g2518 254 Gene3D - 46 232 - -
Dere05g2518 254 MobiDBLite consensus disorder prediction 215 237 - -
Dere05g2518 254 SUPERFAMILY CheY-like 44 188 IPR011006 -
Dere05g2518 254 Pfam Response regulator receiver domain 47 181 IPR001789 GO:0000160
Dere05g2518 254 Coils Coil 187 207 - -
Dere05g2518 254 SMART REC_2 45 183 IPR001789 GO:0000160
Dere05g2518 254 ProSiteProfiles Response regulatory domain profile. 46 187 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2518 Dere-ChrDere05 35701030 35703746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2518 44 252 Response Regulator Gene Family AT3G57040 47.391 1.48e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere05g2518 Response_reg 1.3e-16 CL0304