Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2494 ATGGGAGATCAGAGTGGTATTGCAAAGCTATGCAGTGGAGTCCGTAAGGTGAAGCCTTACCTTGCTATGGTGTCCCTTCAGTTTGGGTACGCAGGGATGTATATAATCACCATGGTTTCCTTCAAGCATGGCTTGAGCCATTGGATTCTCTCTGTCTATCGTCACATAGTTGCCACTCTCGTCATTGCCCCTTTTGCCTTCGTTCTCGAAAGAAAAATAAGGCCAAAGATGACTCTTCCCGTCTTCTTGAGGATTGTGGTGCTTGGTTTCCTTGAGCCAGTGCTTGATCAGAACTTGTACAACATGGGGATGAAGAACACCTCAACAACGTTTGCTTCAGCCACCGTCAATGTCCTCCCGGCCATTACTTTTATAATGGCAATCATTTTCAGGTTGGAGAAGTTGAACCTCAGAGAAATACACAGCATAGCGAAGGTAACTGGCACAGTGATAACAGTGTCGGGAGCCATGGTTATGACTTTGTACAAAGGTTCTGCACTTCACATCATGAACGGCTCAGCAGCATCGAGCCACCATGACGCCTCCACCACCCAGCCCTCTGAACAGAACTGGGTGCTTGGCACTGTAATGCTCATAGCTAGTTGTGGTGGTTGGGCTAGCTTCTTCATCTTGCAATCATTCACCTTGAAGAAGTACCCAGCAGAGCTATCCCTCACAGCTTGGATTTGCTTGATGGGTATCTTCGAGAGTGCAGTCGCTTCCCTCATCGCGGAACGGAACATGAAAGTGTGGGCTTTGGGCTGGGACTCTAGGCTCCTCGCTTGTGTTTATTCTGGGATTGTATGCTCTGGAATGGCATACTATATCCAGGGCATCGTGACCAGGGAACGAGGACCTGTGTTTGTGACCTCTTTCAGCCCTCTGTGTATGATTATCACTGCTGCTTTGGGTACCATTATTCTAGCTGAGCAAGTTTACGTGGGAAGTATAATTGGAGCCATTCTCATTGTCTTGGGGCTTTACACTGTGGTATGGGGAAAAAGCAAAGACCCCATAAACCCAACACAAACAGAGAAAGGTGAAGGCCACGAATTGCCCATAAAAGATAGCAAAACGTCAGGAATGTCAGACAATTTTGAGAACATCGAGGTCAGTGTTCCTGCTGATATGATGAAGGGTTTGGGGAAGAATGTCCCACCAGCGGCAAGATCTTAA 1176 0.4745 MGDQSGIAKLCSGVRKVKPYLAMVSLQFGYAGMYIITMVSFKHGLSHWILSVYRHIVATLVIAPFAFVLERKIRPKMTLPVFLRIVVLGFLEPVLDQNLYNMGMKNTSTTFASATVNVLPAITFIMAIIFRLEKLNLREIHSIAKVTGTVITVSGAMVMTLYKGSALHIMNGSAASSHHDASTTQPSEQNWVLGTVMLIASCGGWASFFILQSFTLKKYPAELSLTAWICLMGIFESAVASLIAERNMKVWALGWDSRLLACVYSGIVCSGMAYYIQGIVTRERGPVFVTSFSPLCMIITAALGTIILAEQVYVGSIIGAILIVLGLYTVVWGKSKDPINPTQTEKGEGHELPIKDSKTSGMSDNFENIEVSVPADMMKGLGKNVPPAARS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2494 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 336 - -
Dere05g2494 391 PANTHER WAT1-RELATED PROTEIN 18 338 IPR030184 GO:0016020|GO:0022857
Dere05g2494 391 MobiDBLite consensus disorder prediction 339 364 - -
Dere05g2494 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 160 - -
Dere05g2494 391 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020
Dere05g2494 391 Pfam EamA-like transporter family 31 150 IPR000620 GO:0016020
Dere05g2494 391 MobiDBLite consensus disorder prediction 341 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2494 Dere-ChrDere05 35471091 35473661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2494 16 359 Nodulin-like Gene Family AT4G08300 64.740 7.86e-164 462