Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2493 ATGGGTGAGGCGGTGATGAATATGTGCTGTGAGAAAGTGGGGGTGTGGTTGAACAGGGCAAGGCCATATCTGCTAATGTTTGGGTTGCAGTTTGGGTCGGCAGGGATGTATATTCTGCTCATGGATGCTATGAATAAGGGCATGAGCCACTACGTCTTCATCGTCTACCGTAACGCCATCGCCGCCATAACTCTTGGCCCCTTCGCTCTTGTTCTGGAAAGGAAAGTTAGACCGAAGATGACATTTCGGATTTTTTGGGAGATTATGGCGCTGGCTTTTGTCGAGGTAATACTTGATCAGTGCTTCACATTCCTGGGCATGAAATTAACGTCGGCATCATTTGCATCTGCTGTGATGAACTCTGTACCCTCCATTACCTTTGTGTTGGCCCTCATTCTTCGGTTGGAGAGGACGAAGATAAAGGAGGTGGCAAGCCAAGCAAAACTGATAGGGACAGCAGTAACATTGGGAGGAGCCTTGTTAATGGCACTGTACAAAGGACCCGTAGTGGGTGTAAATGGATCATCAAGCGCCCATGCACCTCACTCTGAGAATGCCAACGACCCTACTGGCTCTCACTGGGTTATGGGTGCCTTCCTCCTCCTCATCGGCTGTGCTGCCTTCTCTGCCTTTTACATTATGCAGGCCATAACATTAAGGAAGTATCCAGCAGAGATGTCGCTGGCCACGTGGATATGCTTTTTGGGCTCATTTCAGAGCGCTGGCGTGGCAGCTTTCATGGAGCGCCACCACCCTCACGCTTGGTCTCTTGGCAGGCAATGGGATTCTAGGTTCTTTGCTCCGGTCTACTCGGGAATAGTGACAACGGGAATGCAATATTACGTGCAAGGCCTGGTGATGAAGACGATGGGCCCAGTGTTCGTGACTGCTTTTAATCCTCTGCGAATGATCATCGTCACGGCCCTCGGCACCTTCATCCTATCCGAGCAACTCCACCTTGGAAGTATTATTGGAGGAGTGGTGGTGGCTGTGGGGCTGTACCTGGTTGCATGGGGCAAATACAAGGAATACAAAAGCGTCATGCCATCCTCCCCTGTAAAGGATCCTACCCCATGGGAGGACCAGCAGCTTCCAGTAACAACCCCAAGAAATGACGATAAACCTCATCAATTGTTGGTACTTGGTGATAAAAACAGCGTTATGGAATCAAGAATCGCATCCAATACACAAGAAAGCCAGTCTTAG 1206 0.4983 MGEAVMNMCCEKVGVWLNRARPYLLMFGLQFGSAGMYILLMDAMNKGMSHYVFIVYRNAIAAITLGPFALVLERKVRPKMTFRIFWEIMALAFVEVILDQCFTFLGMKLTSASFASAVMNSVPSITFVLALILRLERTKIKEVASQAKLIGTAVTLGGALLMALYKGPVVGVNGSSSAHAPHSENANDPTGSHWVMGAFLLLIGCAAFSAFYIMQAITLRKYPAEMSLATWICFLGSFQSAGVAAFMERHHPHAWSLGRQWDSRFFAPVYSGIVTTGMQYYVQGLVMKTMGPVFVTAFNPLRMIIVTALGTFILSEQLHLGSIIGGVVVAVGLYLVAWGKYKEYKSVMPSSPVKDPTPWEDQQLPVTTPRNDDKPHQLLVLGDKNSVMESRIASNTQESQS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2493 401 MobiDBLite consensus disorder prediction 349 377 - -
Dere05g2493 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 341 - -
Dere05g2493 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Dere05g2493 401 Pfam EamA-like transporter family 196 337 IPR000620 GO:0016020
Dere05g2493 401 Pfam EamA-like transporter family 26 162 IPR000620 GO:0016020
Dere05g2493 401 PANTHER WAT1-RELATED PROTEIN 22 348 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2493 Dere-ChrDere05 35458937 35461148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2493 17 396 Nodulin-like Gene Family AT2G37460 44.474 1.14e-112 333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2493 05 35458937 35461148 Dere05g2493 05 35458937 35461148 ECH