Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2481 ATGGCTATGCCCATGCCCATTGACATGTACGCCATCCCTGAGCTCGACTTTTGCGGTTACACCACCACCACTTCTTCCGACGATGACCATTGTAATGACTGGAACCACTGGTCGCCCGTCGTCAACTGGGACACCTTCACTGGCGGCCCCGGCCACGAAGGCTTCCACGACCACATGGAAACCATGATGGACGACGTGGCCGGGCCGATGAGCCCCCAAACGGATGCCGGTGTGGAAGAGGAAGGGTGTTGCAACTCTGCTTCCACGACGGACGACGAAGTAAACGGTGAGGAGGATTTGAAGGGTCTGAGGTTGGTGCACCTGCTGATGGCGGCGGCCGAGGCTCTCACCGGCATCAACAACAGCCGTGATCTGGCTCGGGTGATATTGGTTCGGCTCAAGGAGTTGGCCTCGCCGACCCATGGAACCAACATGGAGAGGCTAGCCGCGTATTTCACGGACGCCTTGCGGGGCTTGGTAGAAGGAACGCACAATAAGCATTGGATCACCAATGGTGGGGGTGGCGAACATCATCAGACCGACTTGCTAACTGCCTTCCAGCTTCTTCAGGACATGTCACCCTACGTCAAGTTCGGCCACTTCACAGCCAATCAGTCCATCTTGGAGGCGGTGGCCCAGGACAGGCGGATCCACATCGTCGACTACGACATCATGGAAGGGACACAGTGGGCCTCCTTGATGCAGGCCCTCGCCTCTCGGAAGGATGGCCCACACATCAGGATCACCGCTCTCTCCAGAGCAGGAAGCGGCAGAAGATCAATCGCCACCGTCCAAGAGACGGGTCGTCGTTTGACTGCGTTCGCGGCCTCCTTCGGCCAAACCTTCTCGTTCCACCAATGCAGGCTGGACTCCGACGAAACGTTTCGACCCTCCGCCTTGAAATTAGTTCGTGGGGAGGCGCTGGTGTTCAACTGCATGCTCCACCTGCCCCACCAGAGCTACCGAGCGCCCGAATCCGTGGAATCGTTTCTGAGGGGAGCGATGGCGTTGAAGGCGAGAGTAGTAACCTTGGTAGAAGAGGAGGGGGGACCCACAGGGGGCTTTGTGCGGAGGTTCATGGACACCTTGCACCATTATTCGGCGTTGTATGATTCGCTGGAGGCGGGTTTTCCGATGCAGGGTCGGGCGAGGGCGTTGGTGGAGCAGGTCTTTTTGGGGCCCCGAATAGCGGCCTCGTTGGCCCGGATATACAGAATGGGTGAATTGCAGGACAGGGAAAGAGGGTCGTGGGGGGAGTGGTTGGGTGAGGTCGGGTACAACGGGGTAGAGATAAGCTTCGCGAACCATTGTCAGGCGAAGCTGTTGTTGGGTTTGTTCAACGATGGGTATAGGGTGGAGGAGTTGGGTAGTAATAATAATAAGTTAGTGTTGAGTTGGAAATCTAGGCGATTGCTTTCGGCTTCGATTTGGGCTCCTTCTGCACACTCTCAAGTTAGGTGTAATTGTCCCACAGACATGAAGCAGTTGATTTTACAGAAGCTTGTTGAAGGAATTGGCCCTCCACTTTGGCACACCCACTGTGGGCATTTTCAGAGGGTATTCGCTTCCTCTACCTCTAGCACGACCAGAAATTCCCTACCTTTCCTTTCCGCCATGTCCGCCCACAAGGACTCCATTCCCAGTCACCATGATACCGCCCCGAAGATCCAGCAACCCTTGCAGGTTGCAAAGCGCTTGGAGAAGTTCAAAACAACAATCTTCAGCCAAATGAGTACGGTTGCCATCAAACATGGGGCCATAAACCTTGGCCAAGGATTTCCCAACTTTGACGGTCCTGAGTTTCTAAAGGAAGCTGCAATTCAGGCTATAAGGGATGGGAAAAATCAGTATGCCCGGGGCCATGGAGTTCCTGACCTGAACTTGGCCATTGCAGATAGATTTAAGAAAGATACGGGACTTGTGGTGGACCCTGAAAAGGAAGTTACCGTTACCACTGGATGTACAGAAGCAATTGCTGCAACTATGTTGGGATTAATAAATCCTGGTGATGAGGTGATTCTATTTGCTCCTTTTTATGATTCTTATGAAGCCACTCTTTCCATGGCTGGTGCTAAAATAAAAAGCATTACTTTGCGCCCTCCGGACTTTGCTGTTCCCATTGAAGAACTGAGGTCCACCATCTCCAAAGGCACCCGTGCCATTCTCATAAATACACCTCATAACCCAACTGGAAAGATGTTCACGAGAGAAGAGCTCAATACTATAGCAGCCCTATGCATTGAGAATGATGTGTTGGCTTTTGCTGACGAAGTTTATGATAAGTTGTCTTTTGATATGGATCACATTTCCGTAGCATCTCTGCCTGGAATGTTTGAAAGGACAGTTACAATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGGTGGAAGATTGGATGGGCGATTGCGCCCCCACACTTAACATGGGGTCTACGACAAGCTCACTCTTTCCTCACTTTTTCCACCTGCACTCCCATGCAGTGGGCAACTGCAGCAGCTCTTAGAGCGCCAGATTCTTACTTTGTGGAGCTCAAGAGGGATTATATGGCAAAAAGGGCGATATTGGTGGAAGGATTGACGGCTGTTGGTTTTAAGGTGTTCCCATCCAGTGGAACTTACTTTGTGGTAGTGGATCACACTCCTTTTGGACTGGAAAATGATGTTGCATTTTGTGAGTATCTAATTAAGGAGGTGGGAGTGGTGGCAATTCCTATCAGTGTATTTTACTTGAATCCAGAAGATGGGAAAAATCTGGTCAGATTTACTTTCTGCAAGGATGAGGAGACTCTGAGGGCTGCAGTTGAAAGGATGAAGGAGAGACTCAAACAAAAATGA 2835 0.5157 MAMPMPIDMYAIPELDFCGYTTTTSSDDDHCNDWNHWSPVVNWDTFTGGPGHEGFHDHMETMMDDVAGPMSPQTDAGVEEEGCCNSASTTDDEVNGEEDLKGLRLVHLLMAAAEALTGINNSRDLARVILVRLKELASPTHGTNMERLAAYFTDALRGLVEGTHNKHWITNGGGGEHHQTDLLTAFQLLQDMSPYVKFGHFTANQSILEAVAQDRRIHIVDYDIMEGTQWASLMQALASRKDGPHIRITALSRAGSGRRSIATVQETGRRLTAFAASFGQTFSFHQCRLDSDETFRPSALKLVRGEALVFNCMLHLPHQSYRAPESVESFLRGAMALKARVVTLVEEEGGPTGGFVRRFMDTLHHYSALYDSLEAGFPMQGRARALVEQVFLGPRIAASLARIYRMGELQDRERGSWGEWLGEVGYNGVEISFANHCQAKLLLGLFNDGYRVEELGSNNNKLVLSWKSRRLLSASIWAPSAHSQVRCNCPTDMKQLILQKLVEGIGPPLWHTHCGHFQRVFASSTSSTTRNSLPFLSAMSAHKDSIPSHHDTAPKIQQPLQVAKRLEKFKTTIFSQMSTVAIKHGAINLGQGFPNFDGPEFLKEAAIQAIRDGKNQYARGHGVPDLNLAIADRFKKDTGLVVDPEKEVTVTTGCTEAIAATMLGLINPGDEVILFAPFYDSYEATLSMAGAKIKSITLRPPDFAVPIEELRSTISKGTRAILINTPHNPTGKMFTREELNTIAALCIENDVLAFADEVYDKLSFDMDHISVASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGLRQAHSFLTFSTCTPMQWATAAALRAPDSYFVELKRDYMAKRAILVEGLTAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLIKEVGVVAIPISVFYLNPEDGKNLVRFTFCKDEETLRAAVERMKERLKQK 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2481 944 MobiDBLite consensus disorder prediction 73 94 - -
Dere05g2481 944 CDD AAT_like 587 939 - -
Dere05g2481 944 SUPERFAMILY PLP-dependent transferases 562 942 IPR015424 -
Dere05g2481 944 Coils Coil 924 944 - -
Dere05g2481 944 Gene3D - 599 837 IPR015421 GO:0003824
Dere05g2481 944 ProSiteProfiles GRAS family profile. 96 478 IPR005202 -
Dere05g2481 944 Pfam Aminotransferase class I and II 587 936 IPR004839 GO:0009058|GO:0030170
Dere05g2481 944 Pfam GRAS domain family 105 477 IPR005202 -
Dere05g2481 944 PANTHER FI04487P 561 943 - -
Dere05g2481 944 FunFam Aminotransferase, class I/classII 599 837 - -
Dere05g2481 944 Gene3D Aspartate Aminotransferase, domain 1 576 937 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2481 Dere-ChrDere05 35331622 35339666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2481 97 479 GRAS Transcription Factor Family AT3G54220 35.190 1.65e-51 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere05g2481 GRAS 7.3e-95 CL0063