Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2477 ATGGGAAAAAAAAGGGAGGAAATGGAGAACACGCAAACATGCCAAATCCATTTCTCCTGTTGTTCCCTCATCAAACCCTTTTTTTGCTTATCTCAATTCTGTATTTCCTCAAACTACTTGATGGAATCTATCTTATACTTCTCTTCCATTTTCCTCTTGTTTTCTGCCATCTCTGCTTACACGTTCTCGGATTATGTCAGTCCAAATTTCAGTGCTTCATATCTTCAATTCATTGATAAATCTGGCACCTTCTTGTCATCCCGCAATGGAACATTTGAGGCTGCTATATTCAATCCTGGTGGTCAACAATCCAGATTCTATCTGTGTGTCATTCATGTGGCATCCAACACCATCATTTGGTCTGCTAATCGTGATGCTCCCATCTCAAGTTCTGATCAAATGAATCTGACTGTCAAAGGGATTACTATTGTTGGTCATGATGGAAATCTCAAATGGTCAACTCCACCATTGAAATCACCAGTATATGCACTAGAACTAACTGATACGGGCAATCTTGTCCTACTAGATCGTTCCAATGGTTCTCTCTGGGAGAGCTTCCAGCATCCAACAGACACAATTGTTATTGGACAGCGGTTACCTGTTGGGACATTGCTGTCAAGTGCGGTATCAGAGTCTGACTTGTCAACTGGTGATTACAACTTGAATATTACAGCATCTGATGCAATACTTCAGTGGTATGGACAGACATACTGGAAGTTGTCAATGGATACAAAAGCCTTTAAGGATTCAAATTATATGGTGGAATACATGGCTATAAACAGGACAGGTCTTGATCTCTTTGGAAGCGATGGAACAGTGACAGTGTTCAAGGTGGTCTTGCCTCCGGCTGATTTCCAGATTGCCAAATTGGCTGCCAATGGCCAGTTCACTGTCAGAAGCTTTTCCGGTACTGAATGGAAGCAGGATTTTGTGGGGCCAGAAGATAGTTGTCAGACACCCTTTATTTGTGGTAGAGTGGGATTATGTACTCTTGGCACTACATCCTCTACACCTACTTGCTCTTGTCCTCCAAACTTCCATGCAGGTTCACGTAATTTTTCGGGTTGTGTGCCTAACAGTGGTTCTTATTCTTTGCCATTTGCATGTAATTCATCTGATTATGACAGTCAATCAAATTCTTCAGCTGTTTCATATTTGAATCTTGGGAATGGTATGGAGTACTTTGGCAATATCTACTCTGATCCAACAATGTATGGAGTGAGTTTAACTGTTTGTCAAGATCAGTGTGCTGGGAGTTGTTCGTGCTTGGGAATTTTCTATGAAAATTCGTCTGGTTCTTGCTATATGCTTGAAAATGAGTTGGGGTCTATTATGTCAAGCGGTGAAGGCGTAAGTGGCCTGTTGGGCTACATTAAAACTATTGTTGTACGTACCACCGAAGCTAACGATCGTACTTCTCAGGAAAAGAAGTTTCCTGAGGCTGCTCTGGTGCTATTACCTGTTACTGGATTCGTTCTTGCTATAGCTTTAGGTTTCCTCTGGCTATTGAGAATCTCCAAGACAAAAGAAATAAAATTAGGTAAATTCAACTCACATTCTTCACAAGACCTGGATGCCTTCTACATTCCAGGCTTACCGAAAAGGTTTGACTATGAAGAACTTGAGGAGGCTACTGATAATTTTAAGACTCTAATCGGGGCAGGTGGGTTTGGTGCTGTATACAAGGGAGTACTGCCTGATAACACCGTTGTGGCAGTAAAGAAAATAGTCAATATGGGAAATCAGGGGAAAAAAGACTTCTGCACTGAGATTGCAATTATTGGAAATATTCACCACGTAAATTTGGTCAAACTAAAAGGCTTTTGTGCTGGAGGGAGACAACGTCTGTTGATTTATGAGTACATGAATCGTGGCTCCCTGGATCGCACCCTCTTTGGCAGTGGACCGGTCTTAGAATGGCAAGAGAGGTTTGATATAGCACTTGGAACAGCGCGTGGCCTTGCATATCTGCACAGCGGGTGCGAGCAAAAGATCATTCATTGTGATATCAAACCAGAGAATATTCTTCTGCACGATCACTTTCAGGCCAAGATATCTGATTTTGGACTCTCAAAACTCCTTAGCCCAGAACAGTCTGGTTTGTTCACAACAATGAGAGGCACCCGTGGTTATCTAGCTCCAGAGTGGCTTACTAACTCCGCAATCACAGAGAAAACTGATGTTTATAGTTTTGGAATGGTACTGCTTGAACTAGTTAGTGGAAGGAAGAATTGTTCTTTAAGGTCACAAAGTCCTAGCAATGATGACACTAACAGTTATGGTGGCCATTCATCGACCTCATCAGTGACAGGATTGGTTTATTTTCCACTATTTGCATTGGAGATGCATGAGCAAGGTAGGTACCTTGAGTTGGCTGACCTCAGGCTAGAAGGGCGTGTTGCAAATGAGGAAGTGGAGAAACTAGTACGTGTAGCCTTGTGTTGTGTTCATGAAGAACCGTCACTTAGGCCAAACATGGTCACTGTTGTAGGCATGTTGGAAGGTGGGACTCCATTGGCTCAACCAAGGATTGAATCTTTGAATTTTTTGCGCTTTTATGGGCGTAGGTTCACAGAAGCTTCAATGATAGCCGAGGAAAATGAGAATGACCCCATGGTGTATCAGTATCAACAAGCAAAAGGATCTACTAGCACAACGAGTGGTTCACAAGTTGCTTTTTCTTACATTTCTTCACAAAATATTTCAGGGCCCAGATAA 2718 0.422 MGKKREEMENTQTCQIHFSCCSLIKPFFCLSQFCISSNYLMESILYFSSIFLLFSAISAYTFSDYVSPNFSASYLQFIDKSGTFLSSRNGTFEAAIFNPGGQQSRFYLCVIHVASNTIIWSANRDAPISSSDQMNLTVKGITIVGHDGNLKWSTPPLKSPVYALELTDTGNLVLLDRSNGSLWESFQHPTDTIVIGQRLPVGTLLSSAVSESDLSTGDYNLNITASDAILQWYGQTYWKLSMDTKAFKDSNYMVEYMAINRTGLDLFGSDGTVTVFKVVLPPADFQIAKLAANGQFTVRSFSGTEWKQDFVGPEDSCQTPFICGRVGLCTLGTTSSTPTCSCPPNFHAGSRNFSGCVPNSGSYSLPFACNSSDYDSQSNSSAVSYLNLGNGMEYFGNIYSDPTMYGVSLTVCQDQCAGSCSCLGIFYENSSGSCYMLENELGSIMSSGEGVSGLLGYIKTIVVRTTEANDRTSQEKKFPEAALVLLPVTGFVLAIALGFLWLLRISKTKEIKLGKFNSHSSQDLDAFYIPGLPKRFDYEELEEATDNFKTLIGAGGFGAVYKGVLPDNTVVAVKKIVNMGNQGKKDFCTEIAIIGNIHHVNLVKLKGFCAGGRQRLLIYEYMNRGSLDRTLFGSGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHDHFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCSLRSQSPSNDDTNSYGGHSSTSSVTGLVYFPLFALEMHEQGRYLELADLRLEGRVANEEVEKLVRVALCCVHEEPSLRPNMVTVVGMLEGGTPLAQPRIESLNFLRFYGRRFTEASMIAEENENDPMVYQYQQAKGSTSTTSGSQVAFSYISSQNISGPR 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2477 905 Gene3D - 77 188 IPR036426 -
Dere05g2477 905 ProSitePatterns Protein kinases ATP-binding region signature. 552 575 IPR017441 GO:0005524
Dere05g2477 905 SUPERFAMILY Protein kinase-like (PK-like) 525 833 IPR011009 -
Dere05g2477 905 ProSiteProfiles Protein kinase domain profile. 546 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2477 905 FunFam serine/threonine-protein kinase PBS1-like 515 621 - -
Dere05g2477 905 Gene3D Phosphorylase Kinase; domain 1 519 621 - -
Dere05g2477 905 PIRSF SRK 36 893 IPR024171 GO:0004674
Dere05g2477 905 SMART serkin_6 546 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2477 905 Pfam D-mannose binding lectin 117 199 IPR001480 -
Dere05g2477 905 SMART blect_4 76 189 IPR001480 -
Dere05g2477 905 MobiDBLite consensus disorder prediction 747 766 - -
Dere05g2477 905 CDD B_lectin 78 189 IPR001480 -
Dere05g2477 905 CDD STKc_IRAK 552 835 - -
Dere05g2477 905 SUPERFAMILY alpha-D-mannose-specific plant lectins 107 240 IPR036426 -
Dere05g2477 905 Gene3D Transferase(Phosphotransferase) domain 1 622 841 - -
Dere05g2477 905 ProSiteProfiles Bulb-type lectin domain profile. 69 187 IPR001480 -
Dere05g2477 905 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 82 187 - -
Dere05g2477 905 Pfam S-locus glycoprotein domain 284 347 IPR000858 GO:0048544
Dere05g2477 905 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 78 839 - -
Dere05g2477 905 FunFam Serine/threonine-protein kinase 622 841 - -
Dere05g2477 905 Pfam Protein kinase domain 549 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2477 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2477 Dere-ChrDere05 35272479 35275196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2477 491 842 Receptor kinase-like Gene Family AT5G20050 39.459 5.61e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere05g2477 Pkinase 1.3e-49 CL0016