Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2467 ATGAACCGTAATTCAATCATAGGATTGAAGCCCATAGCGAGCCCACTACCTTCGGCGTACCGCCAATCGGGACATTTCAAAATCTGTTTCCATCCCTCTCAGTCACTCCGGAGCGCACTTTCTCACTGGCTTCGACACCAGAAGCAGAAATGCCGTGGAGATTACTCCATGGATGGGAAGGCTAACCTTCCGGTCCCACCTCCAACTGCGAAGGACCTGATCCGTCCAATCAATCCCGATAATACATCGTCTTCATCATCGTCCATCTCTTCTTCCTCTCCGCCGGACTTCCTCCGGCATGTTCAAGCTGCCTTCAAGCGACATCGTCCTCTGGGTACAATGCAATCAAATATAAGGCCAAGGCGCATGATGGTTGCTCAAAGAGAGGTGTCAAAAGGCTCTACATTGAAAATTGGTCCAACTGTGGATATTAAGAAGTCTCAAGACATATCCATAGGTAAGGGTCAATCAGAGAAGGAGGAGTCCCTTGCACATAGAAGGAGCACAAACTCTACTATTGGGGAAGGTCAAGAGGGCGCATCAATCACACCTCCTTCAATTTCTGGCAGCAGCAACAATGCCCTTGATAAAGGATGCAACCCATTTAATGCTCAAGAATGTCATCCAAATGCAATGACTACTTGTAAAGACAAGATTATCATGCATTCTTTGCAAGTGGAATCTCAAAATGTAGATGGTCTGAAGAAAGTCCAGTTCTCTGCTGGAAAAAACACTACTGCCCAGGGGGCCAATGATGGAAAGGCCACTGAGTTGGAGAACTTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCTGCAAGCAGCCAACTGGAAGAATCTAATGTATTCAATCAAGATTCAAAGCACCAAAGTATTTTGCAGGCAGAGTCTGAATTAAGTTTGAGATCTGATGGAGGATTAAGTTCTCAGTTGGCAAAAAGAACAACAGCTATTCAGGATCATCTGCAGCAATTTAGTAACTTCTTAACTCAACCTGCTACTCAATCTTCAGTAGTGGGACCGTCGTGTGCTACAACAACATCAGTCCATTCATCTTCAGCTCCTATGCTAAATTCAACAACCCATTATTCTCATTCACATCTAGATAGTGGTTCACATGTAGCAGTTGAACCTTTGAGGGACAGTAATATTAGTTCTCATCCTGTAACTCAAGGAGTTGTGAAATCATCAAATACTTCCCTAAAAGAGACCAATGGAATGTCAGTGGATCAAGCAGCAGTTGTATTCCAAGCTTCTAGTTCTGCCATTAGTGCAGGGTCAGCAATTAAGGATGGTGACCTATCTAAGGAGCAGCAAGGCAGTGTGCTAAAGGAAACTAACATTTCTAAAACGACTCCTTATCATGATGACAAGTCAATAAAAAGGAAAGAGTCTGCAGATGTTACCAACATTCAACCTCAGGCTCCAATGTCCAAAACCTCATTTTCAGATGTGAAGTTGGAGTCTTCTAAGTCAGATAAGCAAGAAAAGGCAGTAAGTAGTAAAGGTGCATCAGCTGCTCGAAAAAGGACCTATGACCCTGATATGTTCTTCAAAGTAAATGGCAAGCTCTATCAAAGGCTTGGCAAGATAGGTAGCGGAGGAAGCAGTGAAGTACACAAAGTAATTTCATCAGACTGTACAATCTATGCATTGAAAAAGATTAAGCTCAAAGGTCGTGATTATGCCACTGCATATGGGTTTTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGAAAGAATAATATTATACAGCTGATTGACTACGAGGTAACTGACAAGGCTTTGCTGGAAGAGGTCATGAGAGGCTCCGTGAGTAATAAAGATGGCCGAGTCAGAGATGATGGATATATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCACATGCTGTCTCAGAAGTGGAAGGAACTGGATGGGAACAACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATACTTCAAGCTGTCAATACAATACACGAGGAACGTATTGTGCACTCTGACCTGAAGCCAGCTAACTTTCTTCTTGTGAAAGGTTCCCTGAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGGGATTCACAGGTGGGCACTCTGAGTTACATGTCTCCAGAGGCATTCATGTGCAATGAGAGTGATGCAAATGGAAATATAATAAAGTGTGGTCGGCCATCGGATATTTGGTCTCTGGGCTGCATTCTTTATCAAATGGTATATGGTAGGACACCTTTTTCAGAGTACAAGACATTCTGGGCCAAATTCAAGGTTATAACAGATCCAAATCATGAAATTACGTATGAACCCGTTTCAAACCCATGGCTTCTGGATATTATGAAGAGGTGTCTAGCATGGGACCGCAATGAAAGGTGGAGAATTCCTCAGCTTCTCCAACATCCTTTCCTTGTTCCACCAGCTCCGTCTCAAACTTCCTCGTCCCAAGACCAAAGCTTTAAATTGCTGCAATTTATTGCTGAAACTTGTATAGATGACCCAGAAGCTTCAAAGCTTTGTTCTCAGCTCCAGCAGGTGGTTGGCGATCCACTCAAGCTAATAACTCCTCACTCACTAAGCTCACGAGATCAACAACGTAAACTATTGTCCCAAATGTCAGAACTTTGCCGCCAGCTGCAGGAGCGTCTGACAAGTGTGGATAAAGAAGGTAGTTAG 2730 0.4315 MNRNSIIGLKPIASPLPSAYRQSGHFKICFHPSQSLRSALSHWLRHQKQKCRGDYSMDGKANLPVPPPTAKDLIRPINPDNTSSSSSSISSSSPPDFLRHVQAAFKRHRPLGTMQSNIRPRRMMVAQREVSKGSTLKIGPTVDIKKSQDISIGKGQSEKEESLAHRRSTNSTIGEGQEGASITPPSISGSSNNALDKGCNPFNAQECHPNAMTTCKDKIIMHSLQVESQNVDGLKKVQFSAGKNTTAQGANDGKATELENLSSHMGSLALTEMEWAASSQLEESNVFNQDSKHQSILQAESELSLRSDGGLSSQLAKRTTAIQDHLQQFSNFLTQPATQSSVVGPSCATTTSVHSSSAPMLNSTTHYSHSHLDSGSHVAVEPLRDSNISSHPVTQGVVKSSNTSLKETNGMSVDQAAVVFQASSSAISAGSAIKDGDLSKEQQGSVLKETNISKTTPYHDDKSIKRKESADVTNIQPQAPMSKTSFSDVKLESSKSDKQEKAVSSKGASAARKRTYDPDMFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKALLEEVMRGSVSNKDGRVRDDGYIYMVLEYGEIDLAHMLSQKWKELDGNNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDIMKRCLAWDRNERWRIPQLLQHPFLVPPAPSQTSSSQDQSFKLLQFIAETCIDDPEASKLCSQLQQVVGDPLKLITPHSLSSRDQQRKLLSQMSELCRQLQERLTSVDKEGS 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2467 909 FunFam serine/threonine-protein kinase mph1 isoform X1 643 825 - -
Dere05g2467 909 MobiDBLite consensus disorder prediction 152 166 - -
Dere05g2467 909 Gene3D Transferase(Phosphotransferase) domain 1 643 830 - -
Dere05g2467 909 FunFam serine/threonine-protein kinase mph1 isoform X2 522 609 - -
Dere05g2467 909 Gene3D Phosphorylase Kinase; domain 1 522 609 - -
Dere05g2467 909 ProSiteProfiles Protein kinase domain profile. 529 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2467 909 CDD PKc_Mps1 527 822 IPR027084 -
Dere05g2467 909 MobiDBLite consensus disorder prediction 147 193 - -
Dere05g2467 909 PANTHER MIXED LINEAGE PROTEIN KINASE 81 852 - -
Dere05g2467 909 Coils Coil 880 907 - -
Dere05g2467 909 SUPERFAMILY Protein kinase-like (PK-like) 524 828 IPR011009 -
Dere05g2467 909 SMART serkin_6 529 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2467 909 MobiDBLite consensus disorder prediction 440 510 - -
Dere05g2467 909 MobiDBLite consensus disorder prediction 54 96 - -
Dere05g2467 909 MobiDBLite consensus disorder prediction 167 193 - -
Dere05g2467 909 MobiDBLite consensus disorder prediction 470 489 - -
Dere05g2467 909 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Dere05g2467 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Dere05g2467 909 MobiDBLite consensus disorder prediction 454 469 - -
Dere05g2467 909 MobiDBLite consensus disorder prediction 76 96 - -
Dere05g2467 909 Pfam Protein kinase domain 529 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2467 Dere-ChrDere05 35188579 35198938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2467 535 823 MAP Kinase Kinase Kinase AT4G08470 29.010 1.11e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Dere05g2467 Pkinase 1.5e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2467 05 35188579 35198938 Dere05g2467 05 35188579 35198938 ECH