Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2458 ATGGCGGCTTCCATCGATAACCGTCAATACGCTGACCCTTTAAACGGCGTTGCTCGTTCCTTCAACGTCTCCCCGCACCGCGGTTGCAACTTCCCTTCCAATCCCACGAGGTCCGAACCTGCCTTGTCAATGGACTTGGATTCCTCGAGTGAAGATGAAAACGACATTGACGAGTGGAAGGACCTAATACGCAAGGGTAACTCCGAAGTGGAGGCCTCCATCTTTGATCCCCGCGACGACGGAACCGCCGACGGCTGGATCGAACGCAACGCCTCCCTGGTCCGTCTGACAGGGAAACACCCCTTCAACTCGGAGCCACCCCTTACCCGCCTCATGCACCACGGCTTCATCACGCCCGTTCCTCTCCACTATGTCCGCAACCACGGCGCCGTCCCTCATGCCCGGTGGGACAGCTGGTCCGTCGAGGTGTGCGGCCTCGTGAAACGCCCCGCCCGCTTTACCATGGACCAGCTCGTCAACGAGTTCCCCTACCGCGAATTCCCAGTCTCGCTGGTGTGCGCCGGCAACAGAAGAAAGGAACAAAACATGGTGAAACAGAGCATCGGTTTTAACTGGGGTGCCGCTGCAGTTTCCACTTCGGTGTGGCGTGGTGTACCGCTAAGGTACGTGCTCAAGCGGTGTGGGATCTACAGCCGGACCAAAGGGGCACTTCACGTGTGCTTCGAAGGAGCCGAGGATCTGCCAGGTGGCGGTGGGTCCAAGTATGGGACTAGCATCAAGAGAGGTATAGCATTGGATCCCTCCCGCGACATCATCCTGGCTTATATGCAAAACGGGGAGCGCTTAGCTCCAGATCACGGCTTCCCAGTGAGGATGATAATACCGGGTTTCATTGGGGGCCGTATGGTCAAATGGCTCAAGCGCATCATCGTTACTCCTCAAGAATCGGACAGTTATTACCATTACAAGGACAACAGAGTACTTCCCTCCCATGTGGATGCCGAGCTTGCCAACGCCGAAGCTTGGTGGTACAAGCCAGAGTATATTATAAACGAGCTCAACATAAACTCCGCGATAACTACGCCATGCCACGAGGAGATCTTGCCCATAAACTCGTGGACTACTCAGAGTCCTTATGTGTTGAGAGGATATGCATATTCCGGGGGCGGAAGAAAAGTGACACGTGTGGAGGTAACACTGGACGGAGGGGAAACGTGGTTGGTGGCCACGTTGGACCACCCAGAGAAACCAAACAAATACGGCAAATACTGGTGCTGGTGTTTCTGGTCATTGGAGGTGGAGGTGCTGGACCTTCTGGGGGCAAAGGAAGTCGCGGTACGCGCTTGGGACGAGGCCCTCAACACCCAACCCGAGAAGCTCATTTGGAATGTCATGGGTATGATGAACAACTGCTGGTTCAAAGTGAAAACCAATGTGTGCAAGGCCAATAAGGGCGAGATTGGAATTGTGTTTGAGCACCCGACCCAACCAGGGAACCAATCTGGTGGGTGGATGGCGAAGGCAAGGCACCTTGAGCAGTCATCGGAGTCCAACCAGACCCTCAAGAAGAGTGTCTCGACACCCTTCATGAACACTGCCTCAAAAATGTACTCCATCTCCGAAGTCAAAAAGCACACTAACCCTGACTCTGCTTGGATCATCGTCCACGGCCACGTCTACGACTGCACCCGGTTCCTCAAGGACCACCCCGGCGGCACCGACAGCATCCTCATCAACGCCGGCTCCGACTGCACCGAGGAGTTCGAGGCCATCCATTCCGACAAAGCCAAGAAAATGCTCGAGGATTACCGAATCGGTGAGCTCATGACTACCGGTTACGCCTCCTCCGACTCGTCGCCCAACAACTCCGTGCACGGCAATTCCAACACCATCCATTTAGCCCCTATCAAGGAAGTGCCACCATCACGTAGCGTGGCCCTCAACCCGCGTGAGAAAATCCCATGCAAGCTCGTGTCCAAAACGTCCATCTCCCACGACGTCAGGCTGTTCCGTTTTGCGCTGCCCTCTGAGGACCAAGTCATGGGTTTGCCAGTTGGAAAGCACATATTCTTATGTGCTACCATTGACGATAAGCTTTGCATGCGAGCTTACACTCCAACCACCAGCGTCGATGAAGTGGGGCACTTCGATCTAGTGGTCAAGATCTACTTCAAAGGGGTACACCCCAAGTTCCCAAACGGTGGGCAAATGTCGCAGCATTTAGATTCGCTTCCTATTGGCTCTGTTTTGGACCTGAAAGGTCCACTAGGCCACATAGAGTACACTGGCAGAGGCAACTTTTTGGTTCACGGGAAGCACAAGTTTGCGAAGAGGCTGGCCATGTTGGCAGGTGGGACGGGGATCACCCCCATTTACCAAGTGGCGCAAGAGATTCTGAAAGACCCAGAAGACCAGACCGAGATGCACGTGGTGTATGCGAATCGGACCGAGGATGATATATTGCTGAGACAAGAGCTGGATGCGTGGGCTAAGAAGTATGATCGGTTCAAGGTGTGGTACGTGGTAGAAAACCCAAGGGAAGGGTGGGAATACAGTGTGGGGTTCATCACGGAGGCTATCCTGAGGGAGCATGTTCCGGAGGCATCAGAGGACACGTTGGCATTGGCTTGTGGGCCACCACCCATGATTCAGTTTGCCGTGAAGCCCAATTTGGAGAAAATGGGGTATGACATTAAGAACGATTTGCTCGTGTTTTAG 2679 0.5424 MAASIDNRQYADPLNGVARSFNVSPHRGCNFPSNPTRSEPALSMDLDSSSEDENDIDEWKDLIRKGNSEVEASIFDPRDDGTADGWIERNASLVRLTGKHPFNSEPPLTRLMHHGFITPVPLHYVRNHGAVPHARWDSWSVEVCGLVKRPARFTMDQLVNEFPYREFPVSLVCAGNRRKEQNMVKQSIGFNWGAAAVSTSVWRGVPLRYVLKRCGIYSRTKGALHVCFEGAEDLPGGGGSKYGTSIKRGIALDPSRDIILAYMQNGERLAPDHGFPVRMIIPGFIGGRMVKWLKRIIVTPQESDSYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSAITTPCHEEILPINSWTTQSPYVLRGYAYSGGGRKVTRVEVTLDGGETWLVATLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEVAVRAWDEALNTQPEKLIWNVMGMMNNCWFKVKTNVCKANKGEIGIVFEHPTQPGNQSGGWMAKARHLEQSSESNQTLKKSVSTPFMNTASKMYSISEVKKHTNPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGSDCTEEFEAIHSDKAKKMLEDYRIGELMTTGYASSDSSPNNSVHGNSNTIHLAPIKEVPPSRSVALNPREKIPCKLVSKTSISHDVRLFRFALPSEDQVMGLPVGKHIFLCATIDDKLCMRAYTPTTSVDEVGHFDLVVKIYFKGVHPKFPNGGQMSQHLDSLPIGSVLDLKGPLGHIEYTGRGNFLVHGKHKFAKRLAMLAGGTGITPIYQVAQEILKDPEDQTEMHVVYANRTEDDILLRQELDAWAKKYDRFKVWYVVENPREGWEYSVGFITEAILREHVPEASEDTLALACGPPPMIQFAVKPNLEKMGYDIKNDLLVF 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2458 892 Pfam Mo-co oxidoreductase dimerisation domain 335 466 IPR005066 GO:0016491|GO:0030151
Dere05g2458 892 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 637 749 IPR017927 GO:0016491
Dere05g2458 892 PANTHER SULFITE REDUCTASE 72 470 - -
Dere05g2458 892 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 552 559 IPR018506 GO:0020037
Dere05g2458 892 CDD cyt_b5_reduct_like 642 892 - -
Dere05g2458 892 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 145 180 IPR022407 GO:0043546
Dere05g2458 892 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 520 598 IPR036400 -
Dere05g2458 892 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 689 696 IPR001709 GO:0016491
Dere05g2458 892 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 860 868 IPR001709 GO:0016491
Dere05g2458 892 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 805 816 IPR001709 GO:0016491
Dere05g2458 892 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 767 786 IPR001709 GO:0016491
Dere05g2458 892 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 836 852 IPR001709 GO:0016491
Dere05g2458 892 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 555 565 IPR001709 GO:0016491
Dere05g2458 892 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 793 802 IPR001709 GO:0016491
Dere05g2458 892 MobiDBLite consensus disorder prediction 28 45 - -
Dere05g2458 892 MobiDBLite consensus disorder prediction 28 54 - -
Dere05g2458 892 FunFam Nitrate reductase 517 598 - -
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 286 299 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 447 460 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 409 419 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 94 108 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 180 192 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 368 382 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 195 210 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 382 394 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 337 349 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 270 283 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 434 446 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 116 132 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 253 269 IPR008335 GO:0016491
Dere05g2458 892 PRINTS Eukaryotic molybdopterin domain signature 169 180 IPR008335 GO:0016491
Dere05g2458 892 SMART Cyt_b5_2 524 596 IPR001199 -
Dere05g2458 892 FunFam Nitrate reductase 339 515 - -
Dere05g2458 892 Gene3D Translation factors 629 743 - -
Dere05g2458 892 PRINTS Cytochrome B5 reductase signature 668 679 - -
Dere05g2458 892 PRINTS Cytochrome B5 reductase signature 860 868 - -
Dere05g2458 892 PRINTS Cytochrome B5 reductase signature 734 748 - -
Dere05g2458 892 PRINTS Cytochrome B5 reductase signature 805 816 - -
Dere05g2458 892 PRINTS Cytochrome B5 reductase signature 689 696 - -
Dere05g2458 892 PRINTS Cytochrome B5 reductase signature 767 786 - -
Dere05g2458 892 Pfam Oxidoreductase FAD-binding domain 642 748 IPR008333 -
Dere05g2458 892 Gene3D - 339 515 - -
Dere05g2458 892 SUPERFAMILY Riboflavin synthase domain-like 630 749 IPR017938 -
Dere05g2458 892 Gene3D - 744 892 IPR039261 -
Dere05g2458 892 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 521 596 IPR001199 -
Dere05g2458 892 FunFam Nitrate reductase [NADH] 744 892 - -
Dere05g2458 892 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 737 886 IPR039261 -
Dere05g2458 892 Gene3D - 98 338 IPR036374 -
Dere05g2458 892 Pfam Oxidoreductase NAD-binding domain 768 874 IPR001433 GO:0016491
Dere05g2458 892 Pfam Cytochrome b5-like Heme/Steroid binding domain 527 595 IPR001199 -
Dere05g2458 892 PRINTS Cytochrome B5 signature 546 556 IPR001199 -
Dere05g2458 892 PRINTS Cytochrome B5 signature 556 570 IPR001199 -
Dere05g2458 892 PRINTS Cytochrome B5 signature 583 595 IPR001199 -
Dere05g2458 892 PRINTS Cytochrome B5 signature 571 578 IPR001199 -
Dere05g2458 892 FunFam NADH-cytochrome b5 reductase 628 743 - -
Dere05g2458 892 SUPERFAMILY E set domains 339 466 IPR014756 -
Dere05g2458 892 FunFam Nitrate reductase 80 329 - -
Dere05g2458 892 PIRSF Nitr_rd_NADH 18 891 IPR012137 GO:0006809|GO:0042128|GO:0050464
Dere05g2458 892 CDD eukary_NR_Moco 79 464 - -
Dere05g2458 892 Gene3D - 516 599 IPR036400 -
Dere05g2458 892 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 77 337 IPR036374 -
Dere05g2458 892 Pfam Oxidoreductase molybdopterin binding domain 128 307 IPR000572 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2458 Dere-ChrDere05 35058248 35061647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2458 630 883 NADPH P450 reductases AT5G17770 41.245 7.79e-55 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2458 05 35058248 35061647 Dere05g2458 05 35058248 35061647 ECH