Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2450 ATGGGCTCGCTGGAGACACCGACGAGTGCTGAGAATGGTTCTTCCCTGCCGGCCGGCAACGGTAAAGTTTCCGCTGCCGATGGGGATCCCTTACAACCGACCGAGCCTGTCGAAAGGGCGACGGAGAAGCCATTGGAATCCGACATGTCAAAGAAGAGGAAAGCATCTATGCTTCCCTTGGAGGTTGGCACGCGGGTCATGTGCCGTTGGAGGGACGGAAAGTTTCATCCCGTGAAAGTCATTGAGCGGCGCAAGATGAATACTGGAGGTCCCAATGATTACGAGTATTACGTCCATTATACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGCTCGAACAACTTGATCTTAATTCGGTGGAGGCTGTTGTTGATGAGAAAGTGGAGGATAAGGTGACGAGCTTGAAGATGACACGTCACCAAAAGAGGAAGATTGATGAGACACATGTAGAGGGCCATGAGGAGCTTGATGCTGCCAGCTTGCGAGAACATGAGGAATTTACGAAAGTGAAAAATATAGCTACTATTGAACTAGGAAGATATGAGATTGAAACATGGTACTTCTCCCCCTTTCCACCAGAATACAATGACTGTTTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGTGATCTTAAGCACCCTCCTGGTGACGAGATATACAGAAGTGGTACACTGTCAATGTTTGAGGTTGATGGCAAAAAGAACAAGGTTTACGGGCAGAATCTTTGTTATTTGGCTAAGTTGTTTCTAGATCACAAGACCCTCTATTATGATGTTGATCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGATGCCACATGGTTGGGTATTTCTCCAAGGAAAAACATTCAGAAGAATCTTACAATCTGGCATGTATTCTCACCCTTCCACCCTACCAAAGGAAAGGCTATGGCAAATTTTTAATTGCTTTCTCATATGAACTTTCCAAAAAGGAGGGCAAGGTTGGCACACCTGAAAGACCCCTTTCAGATCTTGGGTTGCTGAGCTACAGAGGATACTGGACCAGGGTCCTTTTAGACATATTAAAGAAGCACAAGGGTAATATTTCTATTAAGGAACTGAGTGACATGACAGCCATTAAAGCAGAAGATATATTAACCACTCTTCAGAGCCTAGAATTGATTCAATACAGGAAAGGACAACATGTTATTTGTGCAGATCCAAAGGTTTTGGATCGCCATCTTAAAGCTGCTGGCAGAGGTGGTCTGGAGGTTGATGTTAGCAAATTGATCTGGACTCCTTATAAAGAACAAGGTTGA 1338 0.4425 MGSLETPTSAENGSSLPAGNGKVSAADGDPLQPTEPVERATEKPLESDMSKKRKASMLPLEVGTRVMCRWRDGKFHPVKVIERRKMNTGGPNDYEYYVHYTEFNRRLDEWVKLEQLDLNSVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2450 445 Pfam MOZ/SAS family 230 407 IPR002717 GO:0004402|GO:0006355|GO:0016573
Dere05g2450 445 Gene3D - 170 226 - -
Dere05g2450 445 Gene3D - 228 440 - -
Dere05g2450 445 Gene3D - 348 428 IPR036388 -
Dere05g2450 445 FunFam Histone acetyltransferase 50 169 - -
Dere05g2450 445 SUPERFAMILY Chromo domain-like 53 170 IPR016197 -
Dere05g2450 445 FunFam Histone acetyltransferase 168 225 - -
Dere05g2450 445 MobiDBLite consensus disorder prediction 1 19 - -
Dere05g2450 445 MobiDBLite consensus disorder prediction 1 53 - -
Dere05g2450 445 PANTHER HISTONE ACETYLTRANSFERASE 46 441 - -
Dere05g2450 445 Pfam MYST family zinc finger domain 171 225 IPR040706 -
Dere05g2450 445 MobiDBLite consensus disorder prediction 39 53 - -
Dere05g2450 445 Gene3D - 48 169 - -
Dere05g2450 445 FunFam Histone acetyltransferase 348 427 - -
Dere05g2450 445 CDD CBD_MOF_like 63 132 - -
Dere05g2450 445 SMART chromo_7 74 133 IPR000953 -
Dere05g2450 445 Pfam RNA binding activity-knot of a chromodomain 60 118 IPR025995 -
Dere05g2450 445 CDD NAT_SF 281 339 - -
Dere05g2450 445 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 169 440 IPR002717 GO:0004402|GO:0006355|GO:0016573
Dere05g2450 445 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 170 441 IPR016181 -
Dere05g2450 445 FunFam Histone acetyltransferase 228 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2450 Dere-ChrDere05 34995285 35001967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2450 4 445 C2H2 Transcription Factor Family AT5G64610 85.520 0.0 791