Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2421 ATGGGTTCAGTGCCTGCTCAGGCTTCCACCATGAGAGAGCAGGGCCACCTTTATCTTGAGGACACTGGGCAGACAGAAAGGTCCCAGTGGGTTCTAAATTCTCCTGACCCTCCACCTCTCTGGACGAAACTGTTTAATTCACTCAAGGTGGCTGTCTTGCCTCACGGCAACAAGTTCTTTTCTCCATCCAAGAACAAAATTTACCATGGACAAGTTGTTTCCTTCTTCCAGAACTTATTCCCGATCCTTACTTGGTTTAGGGATTACAAGGCCTCCAAGTTTAAAGATGATTTGTTAGCCGGTTTAACTCTAGCCAGCCTCAGCATACCTCAGAGCATAGGGTATGCTAATTTAGCAAGACTTGATCCTCAATATGGCCTGTATACCAGTGTTGTTCCTCCTCTTATCTATGCTGTAATGGGCAGTTCAAGAGAAATTGCAATTGGACCCGTCGCTGTAGTATCATTGCTGCTATCTTCCCTGCTCTCGCAAATGGAAGATCCTGCTGCTAACCCCATTGCCTACAGAAACCTTGCCTTTACGGTGACCTTCTTTGCTGGAATCTTTCAAGCTACATTTGGAATTTTGAGGCTGGGTTTTCTTGTGGATTTTCTTTCGCATGCGGCGTTAGTTGGATTCATGGCAGGTGCAGCTATCATGATTGGTCTTCAGCAACTCAAGGGATTGCTGGGGATTGCTCACTTCACCAACAAAACTGATGCCGTATCAGTTTTGGAGTCTGTTCATAAGTCACTCCACCATCAACTTTCTGCAAATTCAGCTGAAAAATGGTACCCTCTGAATTTTGTCCTGGGGTGTTCGTTCCTGATTTTCCTTCTGATTAGCCGGTTTATTGGAAGAAGAAACAGAAAGCTTTTCTGGTTGCCTGCTATTTCTCCTCTATTATCGGTTATACTATCAACTTTAATTGTATATTTGACAAAAGCCGATAAGCATGGAGTTAATATAATAAAGCGCGTCAAAGGAGGCCTGAATCCAAGTTCAGCTCACCTCTTACAATTCCATGGTCAACATGTTGGACAAATAGCAAAAATTGGGTTAATTTCTGCCATCATCGCTCTCACTGAAGCAATAGCTGTTGGCCGATCTTTCGCTTCCATTAAAGGGTACAATCTGGATGGGAACAAAGAAATGTTAGCAATGGGGTTCATGAACATTGCAGGATCTTTGACTTCATGCTATGTGGCAACTGGATCTTTCTCAAGGACTGCAGTGAATTTCAGTGCAGGATGTCAAACAGCCATATCAAATATTGTGATGGCAACCACTGTGCTTGTGTCACTAGAATTATTTACAAGGCTCTTATACTACACTCCAGTGGCTATACTTGCTTCCATCATCCTCTCAGCACTTCCCGGACTTATTGACATAAACGAAGCTTATTATATCTGGAAGGTTGACAAATTAGACTTTCTTGCGTGTATTGGTGCTTTCCTTGGCGTCTTGTTTAAATCGGTAGAGATTGGTCTTCTTGTTGCAGTAACAATCTCGTTTGCAAAGATACTGATACAATCAATTCGACCTGGAATAGAAGTTCTAGGGAGAGTTCCAAGAACAGAAGCATTCTGTGATGTTAGTCAGTATCCCATGGCCATAAGCACTCCTGGCATCTTGGTTTTGCGCATAAGCTCTGGCTCACTTTGCTTTGCAAATGCTAACTTTGTCAGAGAAAGAATACTGAAATGGGTTGCAGAAGAAGATAATGATCTTAAAGAGACTGCCCGGGGAAAGGTCCAAGCAGTGATCCTGGACATGACCAACCTGATGAATGTTGATACTTCTGGAATTCTGGCTCTGGAGGAACTGCACAAGAGGTTGCAATCCCGTGGTGTAGAATTGGCTATGGTGAACCCAAGGTGGCTAGTTATTCACAAACTTAAAGTAGCGCACTTTGTGGATAAAATGGGAAAAGAATGGCTTTTTCTTACTGTTGGTGAAGCTGTTGACGCATGTTTGTCATCTAACTTTGTCATCCCTTGA 2001 0.4313 MGSVPAQASTMREQGHLYLEDTGQTERSQWVLNSPDPPPLWTKLFNSLKVAVLPHGNKFFSPSKNKIYHGQVVSFFQNLFPILTWFRDYKASKFKDDLLAGLTLASLSIPQSIGYANLARLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLLSQMEDPAANPIAYRNLAFTVTFFAGIFQATFGILRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGIAHFTNKTDAVSVLESVHKSLHHQLSANSAEKWYPLNFVLGCSFLIFLLISRFIGRRNRKLFWLPAISPLLSVILSTLIVYLTKADKHGVNIIKRVKGGLNPSSAHLLQFHGQHVGQIAKIGLISAIIALTEAIAVGRSFASIKGYNLDGNKEMLAMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAISNIVMATTVLVSLELFTRLLYYTPVAILASIILSALPGLIDINEAYYIWKVDKLDFLACIGAFLGVLFKSVEIGLLVAVTISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMAISTPGILVLRISSGSLCFANANFVRERILKWVAEEDNDLKETARGKVQAVILDMTNLMNVDTSGILALEELHKRLQSRGVELAMVNPRWLVIHKLKVAHFVDKMGKEWLFLTVGEAVDACLSSNFVIP 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2421 666 Pfam STAS domain 535 654 IPR002645 -
Dere05g2421 666 CDD STAS_SulP_like_sulfate_transporter 535 651 - -
Dere05g2421 666 Gene3D STAS domain 514 661 IPR036513 -
Dere05g2421 666 SUPERFAMILY SpoIIaa-like 541 658 IPR036513 -
Dere05g2421 666 NCBIfam sulfate permease 81 654 IPR001902 GO:0016020|GO:0055085
Dere05g2421 666 ProSiteProfiles STAS domain profile. 551 658 IPR002645 -
Dere05g2421 666 Pfam Sulfate permease family 94 482 IPR011547 GO:0016020
Dere05g2421 666 PANTHER SULFATE TRANSPORTER 70 658 IPR001902 GO:0016020|GO:0055085
Dere05g2421 666 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Dere05g2421 666 FunFam Sulfate transporter 31 514 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2421 Dere-ChrDere05 34606283 34609415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2421 24 659 Inorganic Solute Cotransporters AT5G10180 65.047 0.0 843
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2421 05 34606283 34609415 Dere04g0939 04 9856043 9859113 CCT