Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2420 ATGTTCTTTTCTCTATCCCACAATAGGCATCGCCGAGAGGACGACAGAGAGAACGTAGTACGCCTTCAGCGACTATTATGGATTTATCGCACCTGGATGGTGAAGGTCATTGTTTCAATTGTTTCAATGGGTCATCAAACAGATGAAAATCTTGAAACAAAAGAGGTGCATGTATCTACACTGGGTCAGGCACCATACGTCCACAGGGTGGGAATTCCTCTGAGACAGAACTTCTTCAAGGAATTCCAAGCCACATTGAAAGAAACATTCTTTGCCGATGATCCTCTACGCTCATTCAAAGATCAGCCTAAATCCCGCAAGTTCATCCTTGGCGCTGAGGCCATATTCCCCATAATTCATTGGGGAAGGAGTTATAATCTTGCTAAATTTAGAGGGGATATTATAGCTGGTCTAACCATTGCAAGTCTCTGCATCCCTCAGGATATCGGATATGCAAAGCTTGCAAATTTAGATCCACAGTATGGACTCTACTCCAGCTTTGTTCCACCGCTGATCTATGCTGTCATGGGTAGTTCCCGCGATATTGCAATAGGACCAGTAGCTGTGGTTTCTCTCTTGCTAGGGACCTTGCTTCAGGATGAGATTGATCCTATAGCAAATGCAGCAGAATATCGGCGACTTGCTTTTACTGCCACTTTTTTTGCAGGGATCACCCAAGCAACTCTTGGGTTTTTAAGGTTAGGTTTCCTGATTGACTTCCTATCGCATGCTGCTATTGTTGGTTTCATGGGTGGAGCTGCCATCACAATTGCCCTTCAACAGCTTAAGGGTTTCCTTGGCATTAAAAAGTTCACAAAGAAAAGTGATATCATCTCTGTGATGCAGTCAGTATTCTCGTCAGCCCATCATGGATGGAACTGGCAGACTATGTGCATTGGAGGATGCTTTTTAGTTTTTCTTTTGTTTGCTAAACATATTGGAAAGAAGGACAATAAATTGTTCTGGATAGCAGCCATTGCCCCGTTGATATCTGTTGTGCTGTCCACTTTAATGGTCTATTTAACCCGTGCAGACAAGAAAGGTGTTGAAATTGTAAGACACATAGAAAAAGGGATCAATCCTTCATCTGTTCATGAAATATACTTTACTGGTGATTACGTGGGGAAAGGTTTCAGAATTGGCGCTGTGGCTGGTATGATAGCATTAACAGAAGCCACGGCAATTGGAAGAACATTTGCTTCCATGAAGGACTATCAACTAGATGGAAACAAAGAAATGGTGGCTTTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCTTGCTATGTAGCAACAGGGTCTTTCTCTCGGTCAGCAGTAAATTACATGGCTGGCTGCCAAACTGCGGTTTCTAATATTGTGATGTCCGTTGTAGTGTTCTTAACCCTGAAATTCATCACACCTCTTTTTAAGTACACTCCAAATGCTATTCTTTCTGCCATCATCATATCTGCTGTTATCAACCTTGTGGACTATAAGGCAGCAGTTTTAATATGGAAGATCGATAAATTTGATTTCGTTGCTTGCATGGGAGCTTTTTTTGGTGTTGTTTTTGTCTCAGTTGAGATAGGACTACTAATTGCTGTCTCTATATCCTTTGCTAAAATTTTGCTCCAAGTCACAAGGCCACGAACAGCTATTTTGGGGAATATTCCTAGGACAACTGTCTATCGAAATATCCAACAATACCCAGAAGCTACAAAGGTTTCTGGTGTTTTGATTGTCAGAGTTGATTCTGCAATATATTTTTCGAACTCTAATTATGTTAGAGAAAGGATACTGAGATGGCTGATGGATGAGGAAGAGCAAGCTAAAGGAGACTACCAAACAAGAATCCAATTTTTGGTAGTTGAGATGTCACCGGTTACTGACATAGATACCAGTGGCATCCATGCCTTTGAAGAGTTATACAGAAGTCTTGAGAAGAGAGATGTTCAGCTTGTTCTGGCAAATCCAGGCCCGGTGGTGATAGACAAGCTTCACGCATCCAATTTTGCAAATATGATTGGGGAGGACAAAATTTTCCTTACTGTTGCAGATGCTGTTGCATTCTGTTCTACCAAGCTAGCTGATGAACCTTGA 2082 0.4174 MFFSLSHNRHRREDDRENVVRLQRLLWIYRTWMVKVIVSIVSMGHQTDENLETKEVHVSTLGQAPYVHRVGIPLRQNFFKEFQATLKETFFADDPLRSFKDQPKSRKFILGAEAIFPIIHWGRSYNLAKFRGDIIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQDEIDPIANAAEYRRLAFTATFFAGITQATLGFLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKSDIISVMQSVFSSAHHGWNWQTMCIGGCFLVFLLFAKHIGKKDNKLFWIAAIAPLISVVLSTLMVYLTRADKKGVEIVRHIEKGINPSSVHEIYFTGDYVGKGFRIGAVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSVVVFLTLKFITPLFKYTPNAILSAIIISAVINLVDYKAAVLIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGNIPRTTVYRNIQQYPEATKVSGVLIVRVDSAIYFSNSNYVRERILRWLMDEEEQAKGDYQTRIQFLVVEMSPVTDIDTSGIHAFEELYRSLEKRDVQLVLANPGPVVIDKLHASNFANMIGEDKIFLTVADAVAFCSTKLADEP 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2420 693 CDD STAS_SulP_like_sulfate_transporter 563 678 - -
Dere05g2420 693 Pfam STAS domain 563 681 IPR002645 -
Dere05g2420 693 FunFam Sulfate transporter 31 542 688 - -
Dere05g2420 693 ProSitePatterns SLC26A transporters signature. 159 180 IPR018045 GO:0008271|GO:0008272
Dere05g2420 693 ProSiteProfiles STAS domain profile. 562 685 IPR002645 -
Dere05g2420 693 Pfam Sulfate permease family 130 510 IPR011547 GO:0016020
Dere05g2420 693 Gene3D STAS domain 542 690 IPR036513 -
Dere05g2420 693 SUPERFAMILY SpoIIaa-like 564 686 IPR036513 -
Dere05g2420 693 NCBIfam sulfate permease 117 681 IPR001902 GO:0016020|GO:0055085
Dere05g2420 693 PANTHER SULFATE TRANSPORTER 76 686 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2420 Dere-ChrDere05 34574634 34581053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2420 44 692 Inorganic Solute Cotransporters AT1G22150 75.730 0.0 994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2420 05 34574634 34581053 Dere04g0938 04 9844929 9848867 CCT