Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2379 ATGGATAAATTATGCTGTTTTAAGTCTTCCTACTCTCAGCTTGTAGCTTCACGTTCTTCATCAAGCACTGGCAAGGGGAAAAATCATGAAGGGTCAATAAAGTATGGTTTCTGCCTCGTAAAAGGAAAAGCTGATCACCCCATGGAGGATTACCATGTTGCCAATTTTGTGCAGATTCAGGAAAAAGAGTTGGGGTTGTTTGCTATATATGATGGCCATCTGGGAGACCGTGTACCGGCTTACTTACAGAAACATTTGCTTACCAATATCATACAACAGGAGGAATTTTGGGAAGACCCCACTGGATCCATCTCAAAAGCATACGAGAGAACAGATCAGGCAATTCTTTCACAGAGCTCTGATTTGGGGCGTGGTGGGTCAACTGCAGTAACTGCAATATTGGTCAATGGCCAAAGGTTGTGGATAGCTAATGTTGGAGATTCACGAGCAGTTCTTTCAAGAAGAGGCCAAGCTATGCAAATGACCACAGACCATGAGCCCAACACAGAACGAGGCAGCATTGAGAATAAAGGTGGTTTTGTCTCCAACTTGCCAGGTGATGTGCCTAGAGTTAATGGACAATTAGCTGTATCTCGTGCATTCGGAGACAAGAGCCTCAAGTCACATTTGCGGTCAGACCCTGATGTACGGAGTACGGATATAAGTCCTGATTTTGATATCTTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGTCTAATCAAGAAGCAGTGGATATTGCCAGAAGGATGAGAGACCCACAGAAAGCAGCTAAGCAATTAACAGCTGAAGCATTGAAAAGAGACAGTAAAGATGATATATCTTGCGTTGTGGGTACTAGCATCATAAACTCCGACGAGGCATGGTTATGGCTTGCTTGCCCGTTTGATCTATTGCTTGATTGTTGCATTTACGGGCGTGTTGCAGGAAAGAAATTAGAAACTGGCCATTGGGCACCTGGGCGGAAGAAGGCAATACAACTAAAGCAAAATCTGCTGGCTAATTTCAGTACCGAACCTTCACAGATTCATGTATATGCAAAGTTGTTCTGGAGAGGACAAGACATACAATTAATTTTATAG 1083 0.4321 MDKLCCFKSSYSQLVASRSSSSTGKGKNHEGSIKYGFCLVKGKADHPMEDYHVANFVQIQEKELGLFAIYDGHLGDRVPAYLQKHLLTNIIQQEEFWEDPTGSISKAYERTDQAILSQSSDLGRGGSTAVTAILVNGQRLWIANVGDSRAVLSRRGQAMQMTTDHEPNTERGSIENKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVRSTDISPDFDILILASDGLWKVMSNQEAVDIARRMRDPQKAAKQLTAEALKRDSKDDISCVVGTSIINSDEAWLWLACPFDLLLDCCIYGRVAGKKLETGHWAPGRKKAIQLKQNLLANFSTEPSQIHVYAKLFWRGQDIQLIL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2379 360 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Dere05g2379 360 SUPERFAMILY PP2C-like 32 278 IPR036457 -
Dere05g2379 360 PANTHER PROTEIN PHOSPHATASE 25 278 IPR015655 GO:0004722|GO:0006470
Dere05g2379 360 Gene3D - 29 282 IPR036457 -
Dere05g2379 360 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Dere05g2379 360 SMART PP2C_4 26 279 IPR001932 -
Dere05g2379 360 FunFam Probable protein phosphatase 2C 39 25 281 - -
Dere05g2379 360 CDD PP2Cc 33 278 IPR001932 -
Dere05g2379 360 SMART PP2C_SIG_2 45 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2379 Dere-ChrDere05 34175255 34181578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2379 1 278 PP2C-type Phosphatase Gene Family AT1G22280 71.127 9.60e-146 412