Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2362 ATGGCTCCTTCCTTGAAGTTCGATTCAAACCTCACAAAGGGAGTCCAATCCCGCCTTCTTGTTGTGCAACCTGAGATGATTTACTTGGTACTCATTGATGGTGATGCCAACAACCTTGGCACGCGAGTGGGCGGCGATTGCGCACATGGGCCCACTAACACCGCATCCAACGTCCAAAATTTAGTCGCCCAGTTTGACATCGATGAGATCGACGGCCATCTGCTTGTGGAGGTGCGTGGCATCGCGATAGGACTTGTCGGGCTCAAAGCGCAGAAACTCATCATGGCTCCTAAGGAATTCCATCTAAATTCCAAACAAAAGCTTAAGCAAGCTGAGCTCCATAGTGGCTCCATCACCCTATGCATTGTAACTCATAGGCCTTGCACAGTAACAAGTCAGCTTGGATGGGATGATAATCTTTTTCAAGCATGGAGACAAGATAGCACATATGGGGCACGTGCAGGAGGACAAAGCTTCATCTCCGCCTTGCAACTGCTGTCTTCCACTATCATGCCCATGGCTCTGCAAGTCGCCTTTGAGCTTGATGTCTTCAACGTGATGGCCAGAGCCGGCGAAGGTACAAAGCTCTCGGCCACAAACATTGCGGCCATAATTTCTTGCAAGAACCCAGAAGTGCTGGTGATGCTGGATCGTGTGCTCAGGCTTCTGGCTAGCCACTCTGTGATTCATTGCTCTATCGTCGATGATCCACAAGGATCGAAACAGAGGATGTACAATCTATCCCTTACTTTGAAGTAA 759 0.4941 MAPSLKFDSNLTKGVQSRLLVVQPEMIYLVLIDGDANNLGTRVGGDCAHGPTNTASNVQNLVAQFDIDEIDGHLLVEVRGIAIGLVGLKAQKLIMAPKEFHLNSKQKLKQAELHSGSITLCIVTHRPCTVTSQLGWDDNLFQAWRQDSTYGARAGGQSFISALQLLSSTIMPMALQVAFELDVFNVMARAGEGTKLSATNIAAIISCKNPEVLVMLDRVLRLLASHSVIHCSIVDDPQGSKQRMYNLSLTLK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2362 252 Pfam Dimerisation domain 173 224 IPR012967 GO:0046983
Dere05g2362 252 FunFam Caffeic acid 3-O-methyltransferase 145 250 - -
Dere05g2362 252 Gene3D - 146 252 IPR036388 -
Dere05g2362 252 SUPERFAMILY "Winged helix" DNA-binding domain 158 248 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2362 Dere-ChrDere05 33983125 33984456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2362 157 252 Monolignol Biosynthesis Gene Families AT5G54160 42.708 3.00e-17 78.2