Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2327 ATGGGGTTTCTTTCTTGCAATGCTGAATCTGCAATCGCAACCTGCGATTCCCACTATTGGGATCTCAAGAAGAAGACTTCCAACAGAGGCGCGCGAAGAAACCAGCAGCATAAGCTAGTAGAGATCAGGGAGTTCCAGTACTCGGAACTTCTCGCCGCCACCAATGGCTTCTCCGCAGATAGCTTCTTAGGCAAAGGCAGCCACGGCAGTGTCTACAGAGCCTTTCTCGACGACGGCAAGCTTATCGCCGCCGTTAAAAGAACTAAGTTCTCCAAGCCTACGGTCACCAGCGTTCGCAACCACACCACCAACTGTACAGGTTGCGCTAACTGCACGAGCCCCGCAGAGAACGAGATCGAGATTCTCTCTCGAGTTCGAAATCCTCGCCGTTTCGTCAACCTCATTGGGTTTTGCACCGACTCCAACGACAACCAATTAATTGTGGTTGAGTACATGCTCAACGGTTCGCTCTACGATGCCTTGCACTCCACCACCAGACTGCCCGGTTGGACCCGGCGGATCAGGTTCGCCTTGCAGGTGGCCAAAGCAGTACAGGCGCTCCACTCTTCGAAGCCCCCGGTGATTCACCGAGACATAAAGTCGTCCAACGTTTTGATCGACGAGAAGGGGAAGGCGAGGCTGGGCGATTTCGGTCTGGCACTGAGGGGACACGTGGAGGACGTTCGCGTGAAATGCACACCACCGGCGGGGACGTTGGGATACCTGGACCCCTGCTATCTTGCGCCGGCGGATCTAAGTACGAAGAGCGACGTGTTCAGCTTTGGGATCTTGTTGTTGGAGATCATCAGTGGCAGAAAGGCCATCGACTTGAATTACAGCCCGCCCTCGGTGGTGGACTGGGCCGTGCCGCTGGTAAAACGTGGCGACTTCGTTGGAATCTGCGACCGCCGGATTGGGAGGCCGTCGGACACAGCGGTTATTCGGCAGTTGGCGGTGTTAGCAGCGAGGTGCGTGAGGTCGACGACGGAGAAGAGGCCGTCGATGTCGGAGGTAGTGGTGTGGCTTGAACAAGTGAAGAAGAGGATTCATGCGATGCCGATATGGAGGGGTCTGAGGGGGCGGGACCAGAATAATGCGGAAGTGGTGTGTGATAGAAACGAAGAAGTGGGGAGGATAGTAAGAGTGGGAAGCAGAAGGAACGGGAAAGTATCGAGTGTGGGTGGCGTAGAGTACGAGAGTGAGAACAGCGTAGTTACGAATGGAGTGGGGAGGTCCAGATCAATGGGGTGTGAGAGTGAGATGAAATCAATGGAGTGGGACCCAAATCGGATCGTGGGGAGGAAGGCAAGTGTGGGTGTGGGAGTGGTTAGGCTGAGCAAGTCCAGGTCTATGGGGGGTTTTGCAGAGTCCACGCCTTTTCTACTATGA 1389 0.5522 MGFLSCNAESAIATCDSHYWDLKKKTSNRGARRNQQHKLVEIREFQYSELLAATNGFSADSFLGKGSHGSVYRAFLDDGKLIAAVKRTKFSKPTVTSVRNHTTNCTGCANCTSPAENEIEILSRVRNPRRFVNLIGFCTDSNDNQLIVVEYMLNGSLYDALHSTTRLPGWTRRIRFALQVAKAVQALHSSKPPVIHRDIKSSNVLIDEKGKARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPADLSTKSDVFSFGILLLEIISGRKAIDLNYSPPSVVDWAVPLVKRGDFVGICDRRIGRPSDTAVIRQLAVLAARCVRSTTEKRPSMSEVVVWLEQVKKRIHAMPIWRGLRGRDQNNAEVVCDRNEEVGRIVRVGSRRNGKVSSVGGVEYESENSVVTNGVGRSRSMGCESEMKSMEWDPNRIVGRKASVGVGVVRLSKSRSMGGFAESTPFLL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2327 462 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2327 462 PANTHER OS01G0253100 PROTEIN 30 348 - -
Dere05g2327 462 Pfam Protein kinase domain 60 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2327 462 SMART serkin_6 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2327 462 Gene3D Phosphorylase Kinase; domain 1 27 151 - -
Dere05g2327 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Dere05g2327 462 FunFam Serine/threonine-protein kinase-like protein 152 355 - -
Dere05g2327 462 SUPERFAMILY Protein kinase-like (PK-like) 41 350 IPR011009 -
Dere05g2327 462 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Dere05g2327 462 Gene3D Transferase(Phosphotransferase) domain 1 152 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2327 Dere-ChrDere05 33639423 33640811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2327 43 388 Receptor kinase-like Gene Family AT3G59420 39.377 1.92e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dere05g2327 Pkinase 3.7e-36 CL0016