Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2323 ATGGGAGAAGATTGTGGAACTTGGGTACCGCAGCTGCATTTTGATTGGCAATCACCCAATTTGAGTTCCTTTGGTGCTTCCGTTGACGCGGGGAAGCAAAATGATATTTCTGCATTTATGAACTCTGGCATTAATATGGTATCCACAAATGATAAATTGCCAGATTATGCACCCTCCACGTTACCACATTTTCAGTTAGGGCAGTCTAATGAACCTCATGGTTGGTCCTATTGTTTGCCTCGCTTTCGACAGGCATTTATGCCTGCTCCAAACTTCACTGTGGAGGACAAGCTTCCTGCTGGGCATGTAAAAGGTATTAGGGAGGAAATTGCACCCAATGGTATACCGGGCTTCCCTCAGAAGCAATTCATTGTTATTGATCAGACGGTTGATCAAACAACATTCGTATATAGTTCTGGGTTTGGGAGTCCTGTTGAGTGCCTTGCTTCTTGGCATTCCAAACTGCATGGTCCTAACTATTTAAATGGGATTGAACCTTCTTTTAGAGGAGATTTGAATCATCTGAATGGACCAACTTTGACTGGTAAAATTGGTGAAAATCAGGGAACTGATGTCCAAAGTGAGATGCATGAAGACACAGAAGAAATCAATGCATTGCTATACTCTGATAGTGATGGTTATTCAGCTGAGGATGATGAAGTCACTAGCACAGGGCATTCGCCCAGTACAATGACCACTCATGATCACCAAGACCTCTTTTGGGGAAGCAATGAAGAAGTTGCTAGCTCCGGTGGAAAAACAAAGAAGCGGAAGCTATTAGATGATGGGGCTTATGATGACATACAACTCATGGACAGTGCCAGTTCTCTGAATCTGAATAGATCCTATGAGAATGGAGACGATGCTGAATCAAGATGTTCAAGTGGCAACAGCCAAGGATCAGGCAATAAGAAGATGAGAAAAGAGAGGGTACGTGATGTTCTGAACATTCTGCAAACCATAATTCCCGGTGGAAAAGAAAGGGATCCAGTTGGGCTTCTTGATGAAGCAATACGTTGCTTAAAATCCTTGAAACTCAAGGCTAGAGCTCTCGGGCTCCATGAATTGTAA 1071 0.4323 MGEDCGTWVPQLHFDWQSPNLSSFGASVDAGKQNDISAFMNSGINMVSTNDKLPDYAPSTLPHFQLGQSNEPHGWSYCLPRFRQAFMPAPNFTVEDKLPAGHVKGIREEIAPNGIPGFPQKQFIVIDQTVDQTTFVYSSGFGSPVECLASWHSKLHGPNYLNGIEPSFRGDLNHLNGPTLTGKIGENQGTDVQSEMHEDTEEINALLYSDSDGYSAEDDEVTSTGHSPSTMTTHDHQDLFWGSNEEVASSGGKTKKRKLLDDGAYDDIQLMDSASSLNLNRSYENGDDAESRCSSGNSQGSGNKKMRKERVRDVLNILQTIIPGGKERDPVGLLDEAIRCLKSLKLKARALGLHEL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2323 356 MobiDBLite consensus disorder prediction 281 302 - -
Dere05g2323 356 MobiDBLite consensus disorder prediction 218 236 - -
Dere05g2323 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 295 344 IPR011598 GO:0046983
Dere05g2323 356 PANTHER TRANSCRIPTION FACTOR BHLH145 8 354 IPR037546 -
Dere05g2323 356 MobiDBLite consensus disorder prediction 214 236 - -
Dere05g2323 356 MobiDBLite consensus disorder prediction 281 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2323 Dere-ChrDere05 33587409 33588479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2323 74 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 29.965 1.20e-23 97.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2323 05 33587409 33588479 Dere05g2323 05 33587409 33588479 ECH