Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2320 ATGGCACCCAGTTTCGATTGCGTCTCAAGTCTTCTTTGTGCAGAAGACAACATCATATTCGATGATAACGATTACGAGACTACGATGGGGCTGTCGGACAATTCATGGCATCAAAGATACCATCGACTCTATAATCCAAGTCTTTACTTTGATGACGCAAATGGGTTGCTGTTACAGAGTGATGAGTGTTTGGCGTTAATGGTGGAAAAGGAATGCCAGCACATGCCTGCTGGCGATTACTTGAACAGGCTACGGAGTGGGGATTTGGACTCTGGGGCCAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCGTCTGCATTTCCGTTTTGGACCTCTCTGTGCATATCTATCCATAAACTATTTGGATCGTTTCCTGTCTGCATATGAATTACCAAAGACAAAATCTTGGTCAATACAATTGCTGGCTGTGGCATGCTTATCTCTCGCTGCCAAACTAGAGGAGACTGAAGTTCCTCTGACTATTGATTTGCAGGTGGGCGAATCCAAGTTTATATTTGAAGCTAGAACAATCCAGAGAATGGAGCTTCTTATACTAAGCACACTGAAGTGGAGAATGCAAGCAATTAGCCCTTTCTCCTTCATGGACTATTTCCTATGCAAGATCAATGAAGATCAAAGTTTACTAAGAACTTCAATTACACAATCTATCCCACTTATTTTGAAAATTGTAAAAGGGATTGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCAGTTGCAATATATATCGTGGAGGAAACCCAGACAGTTAACACTGAGAAAGCTATTTCTGTTCTGGTTCAACACGTGGAAAAGGAGAAAGTCTTGAAGTGTATGAAAATGGTCCAAGAGTTGTCATCAAACAGCAGCATCAGCAGCTCTTCTAGTGCTCCTTCTGTTCCCCAAAGCCCCATAGGGGTGTTAGATGGATCATGCTTGAGCTACAAAAGCGATGACATAAATGATGGTTCATGTGCAAATTCTTCACATAATAATAGCCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTGTGGAGTAGAGCTATTATAG 1059 0.4193 MAPSFDCVSSLLCAEDNIIFDDNDYETTMGLSDNSWHQRYHRLYNPSLYFDDANGLLLQSDECLALMVEKECQHMPAGDYLNRLRSGDLDSGARKEAIDWIEKVRLHFRFGPLCAYLSINYLDRFLSAYELPKTKSWSIQLLAVACLSLAAKLEETEVPLTIDLQVGESKFIFEARTIQRMELLILSTLKWRMQAISPFSFMDYFLCKINEDQSLLRTSITQSIPLILKIVKGIDSLEFKPSEIAAAVAIYIVEETQTVNTEKAISVLVQHVEKEKVLKCMKMVQELSSNSSISSSSSAPSVPQSPIGVLDGSCLSYKSDDINDGSCANSSHNNSPDAKRRKLNKTCGVELL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2320 352 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Dere05g2320 352 Gene3D - 77 194 - -
Dere05g2320 352 SUPERFAMILY Cyclin-like 178 286 IPR036915 -
Dere05g2320 352 SMART cyclin_7 99 187 IPR013763 -
Dere05g2320 352 FunFam D2/4-type cyclin 77 189 - -
Dere05g2320 352 SUPERFAMILY Cyclin-like 57 193 IPR036915 -
Dere05g2320 352 CDD CYCLIN_AtCycD-like_rpt2 196 284 - -
Dere05g2320 352 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Dere05g2320 352 Pfam Cyclin, C-terminal domain 197 293 IPR004367 -
Dere05g2320 352 FunFam D6-type cyclin 190 282 - -
Dere05g2320 352 PANTHER CYCLINS 61 294 IPR039361 -
Dere05g2320 352 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Dere05g2320 352 SMART Cyclin_C_2 196 305 IPR004367 -
Dere05g2320 352 Gene3D - 66 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2320 Dere-ChrDere05 33567502 33569362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2320 67 328 Core Cell Cycle Gene Families AT2G22490 47.794 7.03e-81 249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2320 05 33567502 33569362 Dere05g2320 05 33567502 33569362 ECH