Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere05g2320 | ATGGCACCCAGTTTCGATTGCGTCTCAAGTCTTCTTTGTGCAGAAGACAACATCATATTCGATGATAACGATTACGAGACTACGATGGGGCTGTCGGACAATTCATGGCATCAAAGATACCATCGACTCTATAATCCAAGTCTTTACTTTGATGACGCAAATGGGTTGCTGTTACAGAGTGATGAGTGTTTGGCGTTAATGGTGGAAAAGGAATGCCAGCACATGCCTGCTGGCGATTACTTGAACAGGCTACGGAGTGGGGATTTGGACTCTGGGGCCAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCGTCTGCATTTCCGTTTTGGACCTCTCTGTGCATATCTATCCATAAACTATTTGGATCGTTTCCTGTCTGCATATGAATTACCAAAGACAAAATCTTGGTCAATACAATTGCTGGCTGTGGCATGCTTATCTCTCGCTGCCAAACTAGAGGAGACTGAAGTTCCTCTGACTATTGATTTGCAGGTGGGCGAATCCAAGTTTATATTTGAAGCTAGAACAATCCAGAGAATGGAGCTTCTTATACTAAGCACACTGAAGTGGAGAATGCAAGCAATTAGCCCTTTCTCCTTCATGGACTATTTCCTATGCAAGATCAATGAAGATCAAAGTTTACTAAGAACTTCAATTACACAATCTATCCCACTTATTTTGAAAATTGTAAAAGGGATTGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCAGTTGCAATATATATCGTGGAGGAAACCCAGACAGTTAACACTGAGAAAGCTATTTCTGTTCTGGTTCAACACGTGGAAAAGGAGAAAGTCTTGAAGTGTATGAAAATGGTCCAAGAGTTGTCATCAAACAGCAGCATCAGCAGCTCTTCTAGTGCTCCTTCTGTTCCCCAAAGCCCCATAGGGGTGTTAGATGGATCATGCTTGAGCTACAAAAGCGATGACATAAATGATGGTTCATGTGCAAATTCTTCACATAATAATAGCCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTGTGGAGTAGAGCTATTATAG | 1059 | 0.4193 | MAPSFDCVSSLLCAEDNIIFDDNDYETTMGLSDNSWHQRYHRLYNPSLYFDDANGLLLQSDECLALMVEKECQHMPAGDYLNRLRSGDLDSGARKEAIDWIEKVRLHFRFGPLCAYLSINYLDRFLSAYELPKTKSWSIQLLAVACLSLAAKLEETEVPLTIDLQVGESKFIFEARTIQRMELLILSTLKWRMQAISPFSFMDYFLCKINEDQSLLRTSITQSIPLILKIVKGIDSLEFKPSEIAAAVAIYIVEETQTVNTEKAISVLVQHVEKEKVLKCMKMVQELSSNSSISSSSSAPSVPQSPIGVLDGSCLSYKSDDINDGSCANSSHNNSPDAKRRKLNKTCGVELL | 352 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere05g2320 | 352 | CDD | CYCLIN_AtCycD-like_rpt1 | 93 | 191 | - | - | |
Dere05g2320 | 352 | Gene3D | - | 77 | 194 | - | - | |
Dere05g2320 | 352 | SUPERFAMILY | Cyclin-like | 178 | 286 | IPR036915 | - | |
Dere05g2320 | 352 | SMART | cyclin_7 | 99 | 187 | IPR013763 | - | |
Dere05g2320 | 352 | FunFam | D2/4-type cyclin | 77 | 189 | - | - | |
Dere05g2320 | 352 | SUPERFAMILY | Cyclin-like | 57 | 193 | IPR036915 | - | |
Dere05g2320 | 352 | CDD | CYCLIN_AtCycD-like_rpt2 | 196 | 284 | - | - | |
Dere05g2320 | 352 | Pfam | Cyclin, N-terminal domain | 64 | 193 | IPR006671 | - | |
Dere05g2320 | 352 | Pfam | Cyclin, C-terminal domain | 197 | 293 | IPR004367 | - | |
Dere05g2320 | 352 | FunFam | D6-type cyclin | 190 | 282 | - | - | |
Dere05g2320 | 352 | PANTHER | CYCLINS | 61 | 294 | IPR039361 | - | |
Dere05g2320 | 352 | ProSitePatterns | Cyclins signature. | 94 | 125 | IPR006671 | - | |
Dere05g2320 | 352 | SMART | Cyclin_C_2 | 196 | 305 | IPR004367 | - | |
Dere05g2320 | 352 | Gene3D | - | 66 | 282 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere05g2320 | Dere-ChrDere05 | 33567502 | 33569362 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere05g2320 | 67 | 328 | Core Cell Cycle Gene Families | AT2G22490 | 47.794 | 7.03e-81 | 249 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere05g2320 | 05 | 33567502 | 33569362 | Dere05g2320 | 05 | 33567502 | 33569362 | ECH |