Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2298 ATGAAAGGTGAATATGTAGAGCAACAGCCTAAGGCTGAAACGACCAATATGTTCTCCAAGCTTCACCACCACCCTTTTGCCCACCATCCCTTCCAGCTCTCCCGCGAATCCCAAACCTCCGAAGAAGATGATAGCCGCAGCAGCGGTGGCCCCACCCCTAACCCCGTCCAAAAGCCCATGCCCGCCGAGCCCGCCTCCGGCGCCGATGGCTCCAGCATTGAGGTGGTGAGGCGGCCGAGGGGGCGCCCACCCGGGTCCAAAAACAAGCCCAAGCCCCCCGTCATCATAACCCGCGACCCCGAGCCCACCATGAGCTCCTACATTCTCGAAGTCCCTGGTGGAAGTGACGTCGTCGAAGCGATTGCTCGCTTCTGTCGCCGCAAGAACACGGGCCTTTGTGTTTTGACGGGCTCTGGAACCGTCGCTAACGTCACTCTCCGTCAACCCTCCACCACCCCGGGAGCCACCGTTACTTTTCACGGCCGTTTCGACATCCTATCGGTGTCCGCCACGTTCCTGGCCGCCCAGCAATCGGGGGCTTCGCCGGCTGTGCCCAACGGTTTCGCCATATCGCTTGCGGGCCCACAGGGGCAGATCGTCGGAGGATTGGTCGCCGGCAATTTGATGGCGGCGGGCACGGTGTTCATCATAGCCGCTTCCTTCAACAACCCATCCTATCACAGGCTGCCTGCTGAAGAGGACGTCCGAAACTCGGTCTCTGGCGGCGGAGATGGACAATCACCACCGGTGTCCGGCGGGGGTGGCGAGAGTGGTCACGCGCCGGCTGAGTCGTGTGGGATGTCTATATATAACTGTCAACTACCGTCGGATGTAATTTGGGCTCCAACTGCAAGACCACCACCACCACCTTACTGA 876 0.605 MKGEYVEQQPKAETTNMFSKLHHHPFAHHPFQLSRESQTSEEDDSRSSGGPTPNPVQKPMPAEPASGADGSSIEVVRRPRGRPPGSKNKPKPPVIITRDPEPTMSSYILEVPGGSDVVEAIARFCRRKNTGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSVSATFLAAQQSGASPAVPNGFAISLAGPQGQIVGGLVAGNLMAAGTVFIIAASFNNPSYHRLPAEEDVRNSVSGGGDGQSPPVSGGGGESGHAPAESCGMSIYNCQLPSDVIWAPTARPPPPPY 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2298 291 MobiDBLite consensus disorder prediction 1 101 - -
Dere05g2298 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 233 - -
Dere05g2298 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 223 IPR005175 -
Dere05g2298 291 CDD DUF296 107 221 IPR005175 -
Dere05g2298 291 ProSiteProfiles PPC domain profile profile. 101 242 IPR005175 -
Dere05g2298 291 MobiDBLite consensus disorder prediction 235 261 - -
Dere05g2298 291 Gene3D - 104 239 - -
Dere05g2298 291 FunFam AT-hook motif nuclear-localized protein 105 240 - -
Dere05g2298 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 281 IPR014476 GO:0003680
Dere05g2298 291 PIRSF ESCAROLA 9 280 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2298 Dere-ChrDere05 33349347 33350222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2298 1 289 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 61.149 1.66e-104 304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2298 05 33349347 33350222 Dere05g2298 05 33349347 33350222 ECH