Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2294 ATGGAGAAAGCAGAAGAAGCCGAACGCTTGCTTGGGGTCGCGGAGAAGCTCTTGCTCAATCGGGATCTCACCGGCTCAAGGGAATTTGCCATTTTGGCCCAGGAAACCGAACCCCTTCTGGAAGGTTCCGATCAGATCTTAGCCGTCGTCGACGTCCTCCTCGCAGCCAAAAACCACATAAGCAGCCACCTCGACTGGTACGCAATTCTTCAGGTCGATCGCCGATCTGACGATTTAGATTTCATTAAGAAGCAATACCGTAGGCTCGCTCTTCTCCTCCACCCTGACAAGAACAGTTTCTCCTTCGCTGATCACGCTTTCAAGCTCGTCGCAGATGCATGGGCTGTTTTATCGGATCCCGCCAAAAAGTCGCTGTACGACAAGGAGGTTAGCTTATTCTCTAAGGTCGATTTGACCGTGCCCGGTTGGGTTCAACAAGAAAAATTGCCGGTTCGTAGGGGCGGAGCCGGGTTCGATTTCAGGAATAGTAGCAACGCCAATAGGTACGAGGGGGCCGATGAGAATTGGCGGCGGAGACCGTCGACCTTCTGGACTGCGTGCCCCTACTGTTACTTACTGTGCGAGTATGATAAAATTTACGAGGGTTGTTGTCTTAGGTGCCAGAATTGTGAGAGGTCATTCCATGGGGTTTCGATTCCGACTTTGCCGCCGCTTGTGCCGGGCCAGGAGGCCTATTACTGCTGCTGGGGTTTCTTTCCATTGAGTTTTGCCACTGCTAATTCAGCCGGCAAGGTGGCTGCGACTCCTCCAGGGTGTTCATGTTGGACGCCCCCGGGTCAGCAGCCTGTGAATGGTTGGAATAATGCGGAACCGGCGGCAGCCGTAAGACCGGTTGCCGCTGCAAGGCCAGTGGCAAAGATGGCGATGGCCGTGGGTGTTTCGAATGGGATCGCTTCAGGTTTGGGATCTACTGGGCGGAAGCGAGGAAGACCCCGGAAGAGTCCTTTACCATTATAA 978 0.5389 MEKAEEAERLLGVAEKLLLNRDLTGSREFAILAQETEPLLEGSDQILAVVDVLLAAKNHISSHLDWYAILQVDRRSDDLDFIKKQYRRLALLLHPDKNSFSFADHAFKLVADAWAVLSDPAKKSLYDKEVSLFSKVDLTVPGWVQQEKLPVRRGGAGFDFRNSSNANRYEGADENWRRRPSTFWTACPYCYLLCEYDKIYEGCCLRCQNCERSFHGVSIPTLPPLVPGQEAYYCCWGFFPLSFATANSAGKVAATPPGCSCWTPPGQQPVNGWNNAEPAAAVRPVAAARPVAKMAMAVGVSNGIASGLGSTGRKRGRPRKSPLPL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2294 325 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Dere05g2294 325 ProSiteProfiles dnaJ domain profile. 65 130 IPR001623 -
Dere05g2294 325 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 269 - -
Dere05g2294 325 Pfam DnaJ domain 65 127 IPR001623 -
Dere05g2294 325 Gene3D DnaJ domain 54 137 IPR036869 -
Dere05g2294 325 SMART dnaj_3 64 122 IPR001623 -
Dere05g2294 325 CDD DnaJ 65 119 IPR001623 -
Dere05g2294 325 SUPERFAMILY Chaperone J-domain 58 129 IPR036869 -
Dere05g2294 325 PRINTS DnaJ domain signature 67 85 IPR001623 -
Dere05g2294 325 PRINTS DnaJ domain signature 86 101 IPR001623 -
Dere05g2294 325 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2294 Dere-ChrDere05 33311547 33312524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2294 6 323 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.863 7.27e-93 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2294 05 33311547 33312524 Dere05g2294 05 33311547 33312524 ECH