Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2291 ATGGCCTATCAAGGTTCAATGCAGTTGTCTCACGACATTAGGGCGTACAATTATGGCGGATGCTGCAGTTCTCATCATAAACCAGTAGGTGTTGGTCGATTACATTTGGCTACCATCAATCTTTTGCCACATGGTTTGAGGCGCGATTCTTCAGCTCTCCATTTTTTAAGTAAAGTACACGCCCCCCTAAGGCCTGTTCCTTCCAGATGTAATGTTTTATTGTGCCGTTCCATACTAATACCAGGTGGAGGGAGTTGGACTCCGCACATGAAATCTGCCTCGGTTATCTTGAAAAGGTCATATGATGCTTTACAAGGAAGCCCTGTCTTGCTTCAGTTGATCCCTGCTCTTGGTGTCATTGCCTTTGCAGTTTGTGGTCTTGAGCCACTTGTTCGTCTGAGCAGGATTATATTTCTCCAAAGGAATGATAATAGTTGGAAGAAAAGTAGTTCGTGTTACATTATGACATCTTATTTTCAGCCGTTGCTGCTGTGGACTGGGGCTATGCTCATCTGCAGGGCATTAGATCCATTAGTCCTACCTTCAGAAGCAAGCCAGATTGTTAAGCAACGGCTGCTGAATTTTGTGAGATCTTTGTCAACAGTGCTCTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGAATCCAGTGATGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTGTATACTGCTGTATGGGTTGCTGCTGTGTCTTTGTTCATGGAGCTACTAGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGTACAGTATTGCTCACACTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCTAGTGTAATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGATGGTGGTCACCAACTATAGTAAGAGGTGACGATCGTGAAGCAGTTCATATTCCTAATCACAAGTTCACTGTTAACGTTGTGCGGAATCTTAGTCAGAAAACTCATTGGCGTATCAAGACTCACCTTGCTATCAGTCACTTGGATGTTAACAAGATTAATAATATTGTAGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTCAGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGAATGTCAATACTGAAAATCAGTCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTCTGTGTTAAGGAGGCCATCCTTTTGGATCTTCTTCGAGTTATCAGTCATCATCGAGCCCGTCTAGCAACACCCATCCGCACAGTCCAGAAAATATACAGTGAGGCTGACTTGGAAAATATACCATTTGGTGACACCATTTTCACTCGTTCCAGAGCAGCATCAAATCGTCCATTTCTACTTATAGAACCACCTTATAAAGTTAATGGGGAAGATAGAGTCAAGGCTTCTGCTCGTTCAACTCGTCCAAGTGAAGAAAAAAATGCCAAAGTTGATGAAACCTTGACGATTGATTCCAAAGGAGATGTCAATCTTCCAGCAACATCGACATCTACATCCAGCGCAAACTCCACGGATAAATCAAAGTCAATTTCTGAAGCACAAACCCAGAATGTGGGTTCTGATAGTTCAGTCCAGAAGACCTTCAAAACCCTGCAGCCCAAGAAGGAAAGTGCAGGAGATGCAGGAAAGGGAACTGCTGTCCCGGCAAATAGAGACCTTGCTCAAAGTGTGATGCCTGAAAATTCTTCTGTTTCTTCCAATGAGTTTGGTGGAAGGGGAGAGACTGCTGCTCCTTCACAGGCAAAGCAAGATGAAGACAAATATGCTGTATCCTCCTCACCAGCCAGGCCTTCCTTGGAAGAAAATATTGTTCTTGGTGTTGCCCTAGAGGGCTCAAAACGAACTCTTCCAATTGATGAAGAAATGACCCCACCTATACCCGCGGAGTCACAAGAATTTGCTGCTCAACGGAATGGCAGTGGACCTCCTGCGAGCAAGGATAAAAAGGATGGTCAAATGACTACGTTTCCGACTACCAAGCAGTGTGATTAG 2115 0.4298 MAYQGSMQLSHDIRAYNYGGCCSSHHKPVGVGRLHLATINLLPHGLRRDSSALHFLSKVHAPLRPVPSRCNVLLCRSILIPGGGSWTPHMKSASVILKRSYDALQGSPVLLQLIPALGVIAFAVCGLEPLVRLSRIIFLQRNDNSWKKSSSCYIMTSYFQPLLLWTGAMLICRALDPLVLPSEASQIVKQRLLNFVRSLSTVLSFAYCLSSLIQQAQKFFMEANESSDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVNTENQSLMILISCFVKTSHFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDTIFTRSRAASNRPFLLIEPPYKVNGEDRVKASARSTRPSEEKNAKVDETLTIDSKGDVNLPATSTSTSSANSTDKSKSISEAQTQNVGSDSSVQKTFKTLQPKKESAGDAGKGTAVPANRDLAQSVMPENSSVSSNEFGGRGETAAPSQAKQDEDKYAVSSSPARPSLEENIVLGVALEGSKRTLPIDEEMTPPIPAESQEFAAQRNGSGPPASKDKKDGQMTTFPTTKQCD 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2291 704 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 696 IPR045042 -
Dere05g2291 704 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Dere05g2291 704 Gene3D - 298 353 IPR023408 -
Dere05g2291 704 MobiDBLite consensus disorder prediction 499 704 - -
Dere05g2291 704 MobiDBLite consensus disorder prediction 596 614 - -
Dere05g2291 704 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Dere05g2291 704 MobiDBLite consensus disorder prediction 499 524 - -
Dere05g2291 704 Gene3D - 163 296 - -
Dere05g2291 704 MobiDBLite consensus disorder prediction 528 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2291 Dere-ChrDere05 33237249 33242717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2291 6 662 Mechanosensitive Ion Channel Family AT1G58200 56.380 0.0 738