Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2282 ATGTTGGCTGAAGATGTTTTCTTTGCATGTTCGATTCTCTATCTATGGAGCGAGCTCTTTCGCTTTTGTCACTCTTCTTTCGGCTTTAACGAGGACTTACCAATGGTGGAGGATGACAAGAAAACTATAAAGGTCACCTTCAGCGAGGAAGAGCTTGCTAATACCATAGAGAAGTATGATGCAACCACGATTTTAACAATGCTTCAGGAAGTTTCGCGTTATCCTGAGTCCAAAATTGATTGGAATGAGTTGGTAAAAAATACGGCGACTGGGATTTCTAATGCTAGAGAGTATCAGATGTTATGGCGTCATCTGGCATATCATGATACTTTGAATGAAAATTTGGAAGACGGGGATGATCCTCTGGATGATGATAGTGACATGGAATGTGAGATGGAAGTATCACCCTCTGTAAACAATGAGACTGCAATAGAGGCTTCAGCATTTGTGAAGGTAATGATGGCTTCCAGTGTGCTAAGTGAATCTGGTCCTAGCAGCTCAACAATTGAGGCTCCAATGACTTTTAGTCTTCCAGTTCGTTCTTCATCTACAACTCCTGAAGAAAATGCGCAGCCCTCTAAGTTGATGCAAGCATCAAGATTTATATTTCCTGTTACTGTTCAGCGACAGACACTGCCAACTTTAACTGAAGGTGTAGAATCTAAGGGAACAGCAGGTGGTAAATTGTCTTCTAAAAGGAAAAGAAAAGCATGGTCAGAAGAAGAGGACATGCAACTGCGAGCAGCTGTTCAGAAATGTGGTGAGGGAAATTGGGCAACCATGTCAAAGGGAGATGACTTCCCTATCAAACGAAGTCCTACGCAGTTGGCCCAGAGGTGGAGCATTTTACGAAAGAAAGATGGAACTACAAATTCAGGAACAAACTTGACCAGCTCGCAGTTTACTGCTGAACAGCTGGCAACTCGTCACTCGTTATCCTTAGCCCTTGATATGCCATTAAAAAAATTAACTGCTCCTGGAACGACCGACCCTGCTAGGACATCATTAAACGTATCAATTAAGAACCCTGTGCAGCCTAGTAATACTGCTGAAACTTCAACAGTTCCCGGTTGCTCTATACAACCTCAGCTTCCATCTCAACAAGCTTTATTGGGAACTTCGGCTTCCCCTGCAAAATCTTTAGTCCCTGAAAGAACAATGCTGAAGTCTAATCCAAGTTCAGATGCTGCTGTAAGAGCTACTGCAGTTGCTGTTGGTGCTCGTATTGTTTCCTCATCAGATATTTTGTCATTGCACAAGGCTACTCAAAGTGCTGTGAAGATTGTGCCTGCAGGTAATTCCTCAATGAAGCTGTCCATGTCTGCTGGTTCTGCCATCCACCCAAAAGCTCCTATAAATGTGCAAGTTTGCACTGGTGTGCCTGCTACAGCTGTTGCCGTTACACCTGCTTCATGCACTGCTACTGTAAAATCTGTTTCTCCATCAGTTGAGAGTACTTCTATTGCTCCATCAAATACTCCTATTTGCTCTGTGGCCAATAAAGTTCCAATTGAGCAAGTTAATCGCACCCAAGAATTGAGAGTCTCCAATTCCAGTGTTCCATCGAACGAGAGGGTCCCAGGTGATGAGCCTTCAGTTGTGGAAAGTTTACCGGGCAAGGAAATTTTAGAACATAAATCAGTTAAAAAAAATCTTGGAGATTCTGACAGTCAGGAAAGAGTTATGGATGTTGATAGTAATCTTAACCAGACCATGAATTTTCCTGTTGATGATGGAGGTGAGTGCCGTTCTGTAATAGATGGAAGTTCTGAAGATCAAGGCTCGAAAGAGAAACAGGTAGATTGA 1806 0.428 MLAEDVFFACSILYLWSELFRFCHSSFGFNEDLPMVEDDKKTIKVTFSEEELANTIEKYDATTILTMLQEVSRYPESKIDWNELVKNTATGISNAREYQMLWRHLAYHDTLNENLEDGDDPLDDDSDMECEMEVSPSVNNETAIEASAFVKVMMASSVLSESGPSSSTIEAPMTFSLPVRSSSTTPEENAQPSKLMQASRFIFPVTVQRQTLPTLTEGVESKGTAGGKLSSKRKRKAWSEEEDMQLRAAVQKCGEGNWATMSKGDDFPIKRSPTQLAQRWSILRKKDGTTNSGTNLTSSQFTAEQLATRHSLSLALDMPLKKLTAPGTTDPARTSLNVSIKNPVQPSNTAETSTVPGCSIQPQLPSQQALLGTSASPAKSLVPERTMLKSNPSSDAAVRATAVAVGARIVSSSDILSLHKATQSAVKIVPAGNSSMKLSMSAGSAIHPKAPINVQVCTGVPATAVAVTPASCTATVKSVSPSVESTSIAPSNTPICSVANKVPIEQVNRTQELRVSNSSVPSNERVPGDEPSVVESLPGKEILEHKSVKKNLGDSDSQERVMDVDSNLNQTMNFPVDDGGECRSVIDGSSEDQGSKEKQVD 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2282 601 MobiDBLite consensus disorder prediction 514 534 - -
Dere05g2282 601 Gene3D - 228 290 - -
Dere05g2282 601 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 288 IPR017930 -
Dere05g2282 601 MobiDBLite consensus disorder prediction 328 362 - -
Dere05g2282 601 Pfam Myb-like DNA-binding domain 235 280 IPR001005 -
Dere05g2282 601 SUPERFAMILY Homeodomain-like 233 286 IPR009057 -
Dere05g2282 601 SMART sant 234 286 IPR001005 -
Dere05g2282 601 CDD SANT_TRF 236 285 - -
Dere05g2282 601 MobiDBLite consensus disorder prediction 325 362 - -
Dere05g2282 601 ProSiteProfiles Myb-like domain profile. 230 284 IPR001005 -
Dere05g2282 601 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 35 557 - -
Dere05g2282 601 MobiDBLite consensus disorder prediction 569 601 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere05g2282 Myb_DNA-binding 3.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2282 05 33149969 33159741 Dere05g2282 05 33149969 33159741 ECH