Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2277 ATGAGCGAAGAAGAGGAGAGTTTTACGGGAACGAACTCGGCGTACCCAGAACTTCTTTTTGACCCTGCAAAATGTGGCACGCTGAATTTGCAAGACAAACAAAAACTAGTCTATGAGATTGCTCTGCAGTCAAAAGATGCCAGAACTATGCTCTATTCCTTTAGTCGCAAGGAGCTTCTAGAAATAATTTGTGCTGAACTTGGCAAAGAGAGGAAGTACACTGGATACACTAAGACTCAAATGATTGAATATCTCCTTAAGATAATTTCTAGGAAATCCAAGTTGCACATCATCCAAAATGCCAGTCATATTGGCTCTAAAAGGAAAAGAGAACCTTCATCTCAAGATTTACATCATGTTCCTCTGGTGAGTACTAAAGAGGGAAATGTAAAATCCTTACTGTGTCAGAATGTTGCATGCAGAGCTACTTTGCATCCAGAAGATGCTTTTTGCAAGAGATGTTCTTGCTGTATTTGTCATTTTTATGATGATAACAAGGATCCTAGTTTGTGGTTAACCTGCGGATCTGATCTTCCTGATGAGAAGGAGTCATGTGGAATGTCATGTCATTTACAATGCGCTATGAGTAATAAGAAGTCTGGCATTTTGAAGGGCAGGTTTGGTACAAAGTTAGATGGAAGTTTCTCATGTGTTTCTTGCGGAAAAATTAATGGATTAATGAGGACATGGAGAAAGCAATTATTGGCTGCAAAAGAAGCCAGAAGAGTTGATATACTGTCTTTACGAATATCCTTGGCTCACAGAATTCTCTTAGGAACTGAGGTATACAAGGAAGTACAGAAGATTGTTGAAACTGCTCTTGCATTGCTGAACAATGAAGTGGGGCCCCTGGATCAGGAATGTTCAAGGATGACACGTGGCATTGTGAACAGGCTCTCGTGTGGTGCTGAGGTTCAGAAGTTGTGCTCTTTTGCAGTTGAATGTTTTGATTCAATGTTTTCTAACATTTACCCTAACTTTGTGGAAAAGAAAGATGCATCAACATGCTCTATACGTTTTGAAGAGTGCCTTCCTACCTCTGTGGTCATTGTGCTAGGGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTTTGGCACAGAATATCAACAAAGGACTACCCTGAACAACCCACCTTCATTGTATTAAGGCCGGAGAAAAGATTTAAGTTGGAAAACCTCTATCCTTCAACTGAGTATTTTTGCAAGGCTTCTCTGTTCAGCAGCACGGGCATTCTGGGCACTGCTGAAGCTAGATGGGTAACACCTTGTAAACCCACTGTATCTCCTTCAAAAGTAACTGGAAATGGCAGTGGCAGGGATCATATTAGATATTCGCCCCATGGATCTTCGGTTACCACTCTGGACATAACAAATGCACAGGAGAAAGAAGCTGCTGAAAATCATCATCGCGTAGAATCTGCCAACTCTGACATCAACTTATTCTCCGGGTACCATTCTGCTAAACTTTTCTTCTTTGATAACATGAGGGGCAAGTTTGAAGGGTTTCTCTCCAAGCCTCCATCAGTTGAATCTCTGCCATCTAGAACTTTTGGTGCGGTTTCACCTCCCACACCTTCTAAATCGGATGAAATGAGACAAATTACAGGTTTGGGTGGTAGAAAACGCTTGGAGGAAAATGATTACGAGTACTCTGTCAGGGTAGTCAAATGGTTAGAGCAGGAAGGTCACGTAGACCAAAACTTCAGAGTAAAATTTCTTACTTGGTTCAGCCTTAAAGCTAATCCGCAAGAGAGAAGGGTGGTTAGTGCATTTGTGGATACGTTGATTGATGACCCACCAAGCTTAGTGGATCAGCTTATACACACCTTCATGGACGAAATATGTTGCGAGCAAAGACCTTAG 1872 0.4151 MSEEEESFTGTNSAYPELLFDPAKCGTLNLQDKQKLVYEIALQSKDARTMLYSFSRKELLEIICAELGKERKYTGYTKTQMIEYLLKIISRKSKLHIIQNASHIGSKRKREPSSQDLHHVPLVSTKEGNVKSLLCQNVACRATLHPEDAFCKRCSCCICHFYDDNKDPSLWLTCGSDLPDEKESCGMSCHLQCAMSNKKSGILKGRFGTKLDGSFSCVSCGKINGLMRTWRKQLLAAKEARRVDILSLRISLAHRILLGTEVYKEVQKIVETALALLNNEVGPLDQECSRMTRGIVNRLSCGAEVQKLCSFAVECFDSMFSNIYPNFVEKKDASTCSIRFEECLPTSVVIVLGYEDHLLKDFLGCRLWHRISTKDYPEQPTFIVLRPEKRFKLENLYPSTEYFCKASLFSSTGILGTAEARWVTPCKPTVSPSKVTGNGSGRDHIRYSPHGSSVTTLDITNAQEKEAAENHHRVESANSDINLFSGYHSAKLFFFDNMRGKFEGFLSKPPSVESLPSRTFGAVSPPTPSKSDEMRQITGLGGRKRLEENDYEYSVRVVKWLEQEGHVDQNFRVKFLTWFSLKANPQERRVVSAFVDTLIDDPPSLVDQLIHTFMDEICCEQRP 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2277 623 MobiDBLite consensus disorder prediction 516 535 - -
Dere05g2277 623 Pfam PHD - plant homeodomain finger protein 135 255 IPR032881 -
Dere05g2277 623 PANTHER VIN3-LIKE PROTEIN 2-RELATED 19 465 IPR044514 GO:0010048|GO:0040029
Dere05g2277 623 CDD PHD_VIN3_plant 155 220 - -
Dere05g2277 623 MobiDBLite consensus disorder prediction 516 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2277 Dere-ChrDere05 33067143 33071369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2277 20 617 PHD Gene Family AT5G57380 33.388 1.33e-98 311