Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2273 ATGCCTCACAGAGCGACTTACTTTTTCCCAAGGCAATTCCCGGAGCGTGGGTTGGATGAATCTTCCAAACAGCTATTAGATCACGAGGAGAAGAAAATCGTCAACTCCATCAAATCAGAAACCTTTGGCCTTGATGGCGACCGGAAAAAGGCAGTTACAACAGCAGCCGCTACTGCAACAGCAAAAAACGATGTCCTTTTCTCGTCTGGGAAACACTCAGCTGTATCCGACCTTTTCGTGGGCAGTGACAAGTTCCGGACTAAGCAGAAGCAAATTGCTGCTTTCTGCGACTGGTTGATAGAGAAAAAAGGGAATAGATCGAGTCACGTGAAACCACCCTCCCGCCGGTTATCATGCGAGGAGGACCGCGAACTTCTGCTTCCGCCGGAGTCTATTCCGGAACCGGCGCCGCCTCCTCCGGAGACAGTTAAAGATACTGCAATTGGCAAGAGTTTTGACCGGCAAGTCTCTTTGCCGAGGTTATCCAGTGGGAGTAGCTATGCTGGGAGCTTGTTCTCAGGGACAACGTTGGACGGGAACTTTTCCAGCGACATTAAGGAGGAAACGTCGTTGTCTCGGGTCTTCAGCACAGCTAGAAGACAGGAGGAAGAAAGTAATGACAGGTCCGTGCAGAAGTACAAGGAGAGCTACTACCTGCAGATTACGCTGGCTAAGAGACTCACTTGTCTTGCAAGTCTCGCTCTTGATGAGCCTGTGCTTACTCTAGACACTGGAGTCGAGACTTGGGATGCCGAATCCGTTTCTTATCGTCTCTGGGTTAATGGCTGCTTATCGTACTCTGACAAGATATCAGATGGTTTTTATAACATTTTGGGGATGAATCCATATCTATGGTTGATGGGCAATGAGTTGGAGGAAGGTAAGCGGCTCCCACCTTTGATGGCGCTTAAAGCAGTCGAACCAAGCGAGACATCTATGGAGGTAGTTCGTGTGGATAGACAAGAGGACTCTCGGCTAAAGGAACTTCATGATAAAGCACAAGAATTGTATTGTGATTCAGAGAACACCTTGGTGTTGGTGGAAAAACTAGGAAAACTTGTTGCGATATATATGGGGGGTACCTTCCCGGTGGAGCAAGGAGATCTCCACAAGCGATGGAAATTGGTTAGTAAGAGATTGAGGAGTTTTCATAAGTGTATTGTGCTCCCTATTGGCGGCCTATCTGCAGGTCTTTGCAGACATCGGGCAATTCTCTTCAAGAGATTGGCAGATTATATAGGTTTGCCATGTCGTATTGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCTTCTTGCCTTGTCAAGATTAAAGATGATAAGCATCTCTCAAGGGAATATGTTGTTGATCTAGTTGGGGAACCGGGAAATGTCCATGGGCCAGATTCCTCAATTAATGGAGCATATGTCTCTTCGACGCCTTCCCCATTTCAAATTTCTCATCTAAAAGAATCCCAATCACCTTATGTGGATGATGCATCAATTTCTCAGTTTAGAAGTTCCATTGGCAGTTCAGTTCTTCCTGAAAGTCATTTATATTCTGGATGTGCAAAGAAAGATCAACCAATCAAAGAAATTGATATGCTGAAATGTCCTACGAACTCCATATATGCTTCAGTTGATCAAACTCATGCAGAAAATACAGAGGAATGTGCAGTTCTAGGTTCAAATTTGCCTTCCATTCAGGAAGGTGTTTCTGAAGCTCCGCATCCAGGCCTTGAGGCATTATTGAATGAATATCCCAGGCTCGTCGAAGATTCAGTTGTTGTAAAAGAAACTTCCAATAATGAGATCATTGTAGCTGGAAATTCTGTTGTAAAAACTACTGCTAAGAAATCTAAACTGGGCTCATCCTACCAGTCAGAACAAGAATATGGAGACAGTAGACTTGAAAACCATGGCCATTTTCCTGCTGGAAACATTCCAAGATATTTGAATCTTGAACCATCACTTGCAATGGATTGGCTTGAAATATCGTGGGATGAATTATGCATTAAAGAGCGTGTTGGTGCGGGCTCATTTGGGACAGTACACCGTGCTGAATGGCATGGATCTGATGTTGCAGTCAAGGTATTAACAGTCCAGGATTTCCAAGATGATCAGTTGAAAGAGTTTCTCAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGTCCTAATCTATCTATAGTGACAGAATACTTGCCAAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCATCTGGTGAAATGTTGGATCAGAGGAGACGATTACGGATGGCTTTGGATGTGGCTAAAGGGATAAATTATCTGCACTGTCTGAACCCTTCCATTGTACACTGGGATCTCAAATCCCCAAACCTGTTAGTGGACAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCGAGATTCAAGGCGAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCATCAAATGAGAAGTCTGATGTTTATAGCTTTGGAGTCATCCTGTGGGAACTTCTGACGATGCAGCAACCATGGAACAGACTAAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATCGGAAGCTCACTATCCCTCCGAACATATCCCCAGTACTGACCTCCCTCATGGAATCTTGTTGGGATGATGACCCCAGTAAACGACCATCTTTCTCCAATATAGTAGAATCGCTAAAGAAGCTGCTGAGGTCTCCAGTGGATATGATAAAAATGGACACTGATGCTGTACCAGTCATTTTGATATTGCAAGTAACATCGTTTGTAATGCAAAGTAGACGCTTTCTTTTTGGCCTAGCGGGGACGTTTCATCAAGCCGAGAGCAAATTCGCACGCATTGTGATCATCCTTTGGAGTTTTGACAGCAGATATTATTGGAGCAGAGACAGTCAAGGTGTCAGTGGGAGGTTTTATCCATATGGATCTCTCAATCGACAATATCAAGGGAAAAAGGCCAATGACACAGATTTACACTCACCACTCAGATGGAACAACACAATATCAATTTCATGTCAAAATTCAGAGTCAAGTTCTTAA 3114 0.4441 MPHRATYFFPRQFPERGLDESSKQLLDHEEKKIVNSIKSETFGLDGDRKKAVTTAAATATAKNDVLFSSGKHSAVSDLFVGSDKFRTKQKQIAAFCDWLIEKKGNRSSHVKPPSRRLSCEEDRELLLPPESIPEPAPPPPETVKDTAIGKSFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDIKEETSLSRVFSTARRQEEESNDRSVQKYKESYYLQITLAKRLTCLASLALDEPVLTLDTGVETWDAESVSYRLWVNGCLSYSDKISDGFYNILGMNPYLWLMGNELEEGKRLPPLMALKAVEPSETSMEVVRVDRQEDSRLKELHDKAQELYCDSENTLVLVEKLGKLVAIYMGGTFPVEQGDLHKRWKLVSKRLRSFHKCIVLPIGGLSAGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDDKHLSREYVVDLVGEPGNVHGPDSSINGAYVSSTPSPFQISHLKESQSPYVDDASISQFRSSIGSSVLPESHLYSGCAKKDQPIKEIDMLKCPTNSIYASVDQTHAENTEECAVLGSNLPSIQEGVSEAPHPGLEALLNEYPRLVEDSVVVKETSNNEIIVAGNSVVKTTAKKSKLGSSYQSEQEYGDSRLENHGHFPAGNIPRYLNLEPSLAMDWLEISWDELCIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPNLSIVTEYLPRGSLYRLIHRPASGEMLDQRRRLRMALDVAKGINYLHCLNPSIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELLTMQQPWNRLSPAQVVGAVAFQNRKLTIPPNISPVLTSLMESCWDDDPSKRPSFSNIVESLKKLLRSPVDMIKMDTDAVPVILILQVTSFVMQSRRFLFGLAGTFHQAESKFARIVIILWSFDSRYYWSRDSQGVSGRFYPYGSLNRQYQGKKANDTDLHSPLRWNNTISISCQNSESSS 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2273 1037 CDD STKc_MAP3K-like 670 918 - -
Dere05g2273 1037 Pfam Ethylene-responsive protein kinase Le-CTR1 251 459 - -
Dere05g2273 1037 FunFam Serine/threonine-protein kinase CTR1 743 928 - -
Dere05g2273 1037 ProSitePatterns Protein kinases ATP-binding region signature. 670 691 IPR017441 GO:0005524
Dere05g2273 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Dere05g2273 1037 Gene3D Transferase(Phosphotransferase) domain 1 743 930 - -
Dere05g2273 1037 Pfam Protein tyrosine and serine/threonine kinase 666 918 IPR001245 GO:0004672|GO:0006468
Dere05g2273 1037 SUPERFAMILY Protein kinase-like (PK-like) 638 918 IPR011009 -
Dere05g2273 1037 PRINTS Tyrosine kinase catalytic domain signature 889 911 IPR001245 GO:0004672|GO:0006468
Dere05g2273 1037 PRINTS Tyrosine kinase catalytic domain signature 845 867 IPR001245 GO:0004672|GO:0006468
Dere05g2273 1037 PRINTS Tyrosine kinase catalytic domain signature 779 797 IPR001245 GO:0004672|GO:0006468
Dere05g2273 1037 PRINTS Tyrosine kinase catalytic domain signature 738 751 IPR001245 GO:0004672|GO:0006468
Dere05g2273 1037 FunFam Serine/threonine-protein kinase isoform 1 654 742 - -
Dere05g2273 1037 ProSiteProfiles Protein kinase domain profile. 664 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2273 1037 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 232 923 - -
Dere05g2273 1037 SMART serkin_6 664 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2273 1037 Gene3D Phosphorylase Kinase; domain 1 657 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2273 Dere-ChrDere05 33037843 33045917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2273 1 934 MAP Kinase Kinase Kinase AT4G24480 59.259 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dere05g2273 PK_Tyr_Ser-Thr 8.8e-66 CL0016