Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2258 ATGGTGGTGAGGAAAGTAGGGAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTTGCCAAAGTGAAGTTCGCGCAGAACACAGAGACGGGGGAGAGTGTCGCCATGAAAGTGCTCGATCGCAGCACCATCATCAAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCCATCATGAAGCTAGTCAGGCATCCATATGTTGTTCGTCTGCATGAGGTTCTAGCAAGCCGTACTAAGATTTATATAATATTGGAGTTCATTACAGGCGGTGAATTGTTTGATAAAATTGTACACCATGGGCGTATTAGTGAAGCTGAATCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGACTTTTGCCACAGCAAGGGAGTTTATCACAGAGATTTAAAGCCTGAAAATCTTTTACTTGATTCACAAGGAAATATAAAGATTTCAGACTTTGGTTTGAGTGCATTGCCAGAACAGGGGGTTAGTATCCTTCGGACAACTTGTGGGACTCCAAACTATGTAGCTCCTGAGGTTCTCAGTCACAAGGGTTACAATGGTGCTTTGGCAGATGTTTGGTCCTGTGGGGTCATCCTTTATGTTCTATTGGCTGGATATCTTCCCTTTGACGAGCTTGATCTTACCACGTTATACAGTAAGATTGATAGAGCAGAATTTTCATGTCCTGCTTGGTTTCCTGTGGGGGCAAAATCTTTAATACATAGAAGTCTGGACCCAAATCCTCAAACTCGTATAACTATTGAACAGATAAGGAGTGATGAGTGGTTTAAGAAGGGCTATGTTCCTGTCAGTCTTCTTGAGTATGAAGATGTAAATTTGGATGATGTAAATGCAGCTTTCGAGGATGCTGAGGATCAAACTGAAAATCAACCGAATGAGAATGAAGACTCGAGTCCTTTAATGCTTAATGCATTTGACTTGATAATTCTGTCTCAAGGCTTAAACCTTGCGTCACTCTTTGATCGTGGACAGGACTCTATAAATTACCAAACACGCTTTATCACTCAAAAGCCAGCGAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCGCAATCAATGGGATTTAAGACCCATATTCGCAACTATAAGATGAGAGTGGAGGGTACTTCAGCTGATAAGACTACTTATTTTTCTGTGATACTGGAAATTTTTGAAGTTGCTCCCACATTTTTTATGGTGGACATTCAAAAAGCAGCTGGAGATGTGGGTGAATACCTCAAGTTTTACAAGAATTTTTGCAGCAATCTTGAGGATATAATATGGAAACTGCCAGATGAAGCAAGCAAATCAAAGATCTCCAGGACTAAAAGCAAAAAGCGTTAG 1341 0.4131 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRISEAESRRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGALADVWSCGVILYVLLAGYLPFDELDLTTLYSKIDRAEFSCPAWFPVGAKSLIHRSLDPNPQTRITIEQIRSDEWFKKGYVPVSLLEYEDVNLDDVNAAFEDAEDQTENQPNENEDSSPLMLNAFDLIILSQGLNLASLFDRGQDSINYQTRFITQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGTSADKTTYFSVILEIFEVAPTFFMVDIQKAAGDVGEYLKFYKNFCSNLEDIIWKLPDEASKSKISRTKSKKR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2258 446 Gene3D Kinase associated domain 1, KA1 302 428 - -
Dere05g2258 446 Pfam NAF domain 305 363 IPR004041 GO:0007165
Dere05g2258 446 FunFam Non-specific serine/threonine protein kinase 2 303 - -
Dere05g2258 446 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Dere05g2258 446 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Dere05g2258 446 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2258 446 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2258 446 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Dere05g2258 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 412 - -
Dere05g2258 446 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2258 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Dere05g2258 446 Gene3D Transferase(Phosphotransferase) domain 1 89 270 - -
Dere05g2258 446 CDD CIPK_C 309 424 - -
Dere05g2258 446 SUPERFAMILY Protein kinase-like (PK-like) 6 305 IPR011009 -
Dere05g2258 446 FunFam Non-specific serine/threonine protein kinase 302 428 - -
Dere05g2258 446 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2258 Dere-ChrDere05 32773254 32778641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2258 1 388 CBL-interacting serine-threonine protein kinases AT4G24400 82.474 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere05g2258 Pkinase 7.9e-71 CL0016