Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2256 ATGGACAATCATTCCCTCTCTTCCTACCCTGATTCCCGCAATTCCTCGCCTTCTTTTCACGAAGTCGACAATGAGAACCCCTCGTTGGAGGATCCTCTTTACACCACTATTAACAACAACTACAAAGTGAAGTTCATGTGCAGCTATGGCGGAAAAGTCCAATTTAGGTCCAACGATAACCAGCTTGCTTATGTCGGTGGTGATACCAAGATCATAACCATTGATCGCAACATTAAGTTCTCGTCTATTATGGCGAAACTCTCGTCTCTCTGCAATGCCGAAGTTTTCTTCAAGTACCAACTTCCCGGTGAAGATCTCGACGCTTTGATTTCGGTCACCAACGACGAGGATCTAGAACACATGATGGTCGAGTATGATCAGTGTCACCGAGCGACAGCGAAACCCGCTAGGTTGAGGTTGTTCCTGTTTCCACCAAACCCTTCGGCTCCGACGAGTTTCGGATCGAACAACTTGAAACCGGAGATGCAGTGGTTTGTAGACGCTCTCAATTCCGTGCACATTCCACACGTCGAGGGTTCTTCACCGTCGGTCCCTGTATCGGCTGCAAATCCGGATTTTCTTTTTGGATTGGATAACAGATATTCAGTTGTTCCAGCGGCGAAACTGCCTGATTCTGTTGCGTCTGTAGTTCCACATGTAGTGGCGAAGGATTCGTCTGCGGGAACGGACGGTGGATCGGAAGACCGGCACGTCGTCGGAGAATCGGCTGTGTCACCCACTGAGATCCAGAGACAGATCGAGGAGTTACAGAGATTGCATCTCGGTAACAATGAACAAATCCTACAACAAAACGGCGAAGACAATAGTAGAGTCAATAACACCGTGGTGGACAATAACTCTCAGAAGAATCCAGAGACAGCGGCACCGTCGCCTACGCTTAGTACTCCAGCTCCGCCACCGGCTGTGGTTTACTTGCCTGAAAGACATATGGCAAGTGCTGGTTATTCGTTAGCGGGTTCTGGAACCGTTACTGAGCAGCCGGTGTATCTCATTGCGACACCAGCCGTAATGTACCATGCTACTACTTTGCGTGCCGGGACTGGACCTGTTGGTGAGCCTTACTATGGAGTCCCGCAAATGGTCCCAGCAGCTGAATTCTACAACGGAGCACCGCCAACATCACTTTCACATTCACATTCACAGTCCAGAAATGGGGCGAAGGTTGAAACTGCTGGAACAGTACAGCCAAAGGTTGGGGTGGCAGCGCCTGGCTATGCACGGGTGGTGTACGACAATGCTGGAAGGCAGGTGTACTTGGCGGCTCCAGCTTGGGGTGGCGTGGTACCTCCATACCAAGAGGTGGCAGCTGGAAGTGATGGGACACAAGGTGGCGGTGGGGCTGTGAATCAAGATGGGAAGGTTTCCAAAGCTGCTTCAGCTGTGTGA 1407 0.5082 MDNHSLSSYPDSRNSSPSFHEVDNENPSLEDPLYTTINNNYKVKFMCSYGGKVQFRSNDNQLAYVGGDTKIITIDRNIKFSSIMAKLSSLCNAEVFFKYQLPGEDLDALISVTNDEDLEHMMVEYDQCHRATAKPARLRLFLFPPNPSAPTSFGSNNLKPEMQWFVDALNSVHIPHVEGSSPSVPVSAANPDFLFGLDNRYSVVPAAKLPDSVASVVPHVVAKDSSAGTDGGSEDRHVVGESAVSPTEIQRQIEELQRLHLGNNEQILQQNGEDNSRVNNTVVDNNSQKNPETAAPSPTLSTPAPPPAVVYLPERHMASAGYSLAGSGTVTEQPVYLIATPAVMYHATTLRAGTGPVGEPYYGVPQMVPAAEFYNGAPPTSLSHSHSQSRNGAKVETAGTVQPKVGVAAPGYARVVYDNAGRQVYLAAPAWGGVVPPYQEVAAGSDGTQGGGGAVNQDGKVSKAASAV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2256 468 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 62 145 - -
Dere05g2256 468 MobiDBLite consensus disorder prediction 444 468 - -
Dere05g2256 468 MobiDBLite consensus disorder prediction 269 297 - -
Dere05g2256 468 CDD PB1_UP2 46 143 - -
Dere05g2256 468 MobiDBLite consensus disorder prediction 378 396 - -
Dere05g2256 468 SUPERFAMILY CAD & PB1 domains 58 153 - -
Dere05g2256 468 MobiDBLite consensus disorder prediction 224 247 - -
Dere05g2256 468 MobiDBLite consensus disorder prediction 378 398 - -
Dere05g2256 468 Gene3D - 63 144 - -
Dere05g2256 468 SMART PB1_new 57 145 IPR000270 GO:0005515
Dere05g2256 468 MobiDBLite consensus disorder prediction 1 31 - -
Dere05g2256 468 Pfam PB1 domain 59 144 IPR000270 GO:0005515
Dere05g2256 468 MobiDBLite consensus disorder prediction 269 306 - -
Dere05g2256 468 PANTHER OS05G0427100 PROTEIN-RELATED 9 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2256 Dere-ChrDere05 32723330 32724736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2256 41 273 MAP Kinase Kinase Kinase AT5G57610 31.799 1.47e-27 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2256 05 32723330 32724736 Dere05g2256 05 32723330 32724736 ECH