Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2236 ATGGCGATTCCGGAGTCTAATCGTCACCAACGGTCCAGAGCTCGACCGTCTTCAGGGCGACCGCCGATTCGGACCAGGGTTCCACTCCGGCAATTGTTTCGGGTGGCTTCAGTGGCTGGTGGTATTCAATTTGGCTGGGCTTTGCAGCTCTCTCTTCTCACGCCTTATGTACAGCAGCTCGGAATTTCTCACGCTTGGGCCAGTATCATCTGGCTCTGTGGTCCACTCTCTGGTCTCTTTGTTCAGCCATTGGTTGGGCACATGAGTGATCGCTGCACCAGCCGGTTCGGCCGCCGGAGACCGTTTATCTTGGCTGGAACAGTGTCCATCATTGTATCGGTTCTGATCATTGGTCACTCCGCTGACATTGGTTGGTTGTTCGGTGACACGGAGAATTCCAGGCCGCGAGCTGTAGGGGTTTTTGTGTTCGGGTTCTGGATTTTGGACATGGCTAACAACATGACTCAAGGTCCTTGTAGAGCTTTGCTTGCTGATCTCACCGGCAAGGATCATCGAAGGACACGTGTGGCAAATGCTTATTACTCTCTGTTTATGGCTATCGGTAACATTCTTGGCTATGCAACTGGATCATACAGTGGCTGGTTTAAAATTTTATCTTTCACACTTACTGATGCATGCAATGTTAGTTGTGCGAATCTCAAGTCTGCTTTCTATCTGGACATTGTTTTTATTGTGATCACCACATATATCAGCATCACAGCAGCTCATGAAGTGCCTCTAAGTTCTAGTGGCGCAGCTCGTGTTGAAGAAGGAGTAGGGGAGTCAGGTAGTGCAGAAGAAGCTTTCATGTGGGAGCTATTTGGAACATTCAGATATTTTACAGCCCCTATATGGATAATTTTGTCTGTTACTGCTTTGACTTGGATTGGATGGTTTCCATTTATTCTCTTTGATACTGATTGGATGGGGCGAGAGATTTATGGGGGTGATCCTAATGAAGGCCCTACATATGACACTGGAGTTAGAATGGGGGCACTCGGTTTATTGCTGAATTCAGTTGTTCTTGGAATAACATCATTGCTCATGGAGAGGCTATGCAGGAAGCGAGGGGCTGGCTTTGTGTGGGGGATTTCAAACATCCTAATGGCTGTCTGCTTTATAGGAATGCTTGTAGTAACCTATGTGGCCAAAAATATTGGCTATTTGGGCAAAGATCTACCACCAACTGGCATTGTGGCAGTGGCATTGATAATTTTTACTATTCTTGGGTTTCCATTGTCGATCACTTACAGTGTTCCATATGCATTAATTTCCTCACATATTGAGTCTCTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTAAATCTGGCAATAGTGATCCCACAGATAGTGGTGTCCCTCGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGGAACTCCCCAGCTTTTGCTGTGGCAGCTATAGCAGCCCTTGTCAGTGGACTCATAGCAGTCTTGGCTATTCCTCGATCTGGTGGTCAGAAGCCCAGAACTCATGCTTGA 1509 0.4738 MAIPESNRHQRSRARPSSGRPPIRTRVPLRQLFRVASVAGGIQFGWALQLSLLTPYVQQLGISHAWASIIWLCGPLSGLFVQPLVGHMSDRCTSRFGRRRPFILAGTVSIIVSVLIIGHSADIGWLFGDTENSRPRAVGVFVFGFWILDMANNMTQGPCRALLADLTGKDHRRTRVANAYYSLFMAIGNILGYATGSYSGWFKILSFTLTDACNVSCANLKSAFYLDIVFIVITTYISITAAHEVPLSSSGAARVEEGVGESGSAEEAFMWELFGTFRYFTAPIWIILSVTALTWIGWFPFILFDTDWMGREIYGGDPNEGPTYDTGVRMGALGLLLNSVVLGITSLLMERLCRKRGAGFVWGISNILMAVCFIGMLVVTYVAKNIGYLGKDLPPTGIVAVALIIFTILGFPLSITYSVPYALISSHIESLGLGQGLSMGVLNLAIVIPQIVVSLGSGPWDQLFGGGNSPAFAVAAIAALVSGLIAVLAIPRSGGQKPRTHA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2236 502 NCBIfam sucrose/proton symporter 27 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Dere05g2236 502 MobiDBLite consensus disorder prediction 1 23 - -
Dere05g2236 502 Pfam MFS/sugar transport protein 47 194 - -
Dere05g2236 502 PANTHER SUGAR TRANSPORTER 26 488 - -
Dere05g2236 502 SUPERFAMILY MFS general substrate transporter 30 495 IPR036259 -
Dere05g2236 502 CDD MFS_SLC45_SUC 32 488 - -
Dere05g2236 502 Gene3D MFS general substrate transporter like domains 23 489 IPR036259 -
Dere05g2236 502 FunFam Sucrose transport protein 26 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2236 Dere-ChrDere05 32517459 32523351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2236 5 498 Sucrose Transporter Gene Family AT1G09960 69.703 0.0 706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2236 05 32517459 32523351 Dere05g2236 05 32517459 32523351 ECH