Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2210 ATGGCGATTGCAGCAGAGACACAGCCCCAACCTCAACCTCAAGACAAGACTTCTTCTGAGGTTTCAGCTGTGGAGAATAGAAGGTGGACCCTCAACGACTTTGATATTGGAAAGCCGCTTGGAAGGGGAAAATTTGGCCATGTCTATTTAGCCAGGGAAAAGAGAAGTAATCATATCGTTGCTCTGAAAGTCCTCTTTAAGAGCCAATTGCAACAGTCCCAAGTTGAGCACCAGCTCAGGCGAGAAGTTGAAATCCAAAGTCATCTGAGACATCCCAACATTTTACGTCTTTATGGATACTTCTATGATCAGAAACGAGTTTATTTGATTTTAGAGTATGCGCCCAAGGGTGAACTTTACAAGGAGTTACAAAAATGCAAATATTTTAGCGAAAGACGTGCAGCTACTTATGTCGCATCATTGGCCCGAGCCCTCATATATTGCCACGGAAAGCATGTAATACATAGGGACATTAAACCTGAGAATCTTCTAATTGGTGCACAGGGTGAACTGAAAATAGCAGACTTTGGGTGGTCTGTGCACACATTCAATCGCAGGCGGACCATGTGTGGAACACTGGATTACCTTCCCCCTGAGATGGTGGAGAGCGTAGAACATGATGCAAGTGTTGATATTTGGAGCCTTGGTGTCCTGTGTTATGAGTTTCTTTATGGAGTCCCCCCTTTCGAGGCTAAAGAACATTCTGAGACATACAGAAGGATCATTCAAGTTGATCTCAAGTTCCCTCCCAAACCAATTGTGTCTTCTGCTGCAAAGGACCTCATCAGCCAGATGCTGGTCAAGGATTCTTCTCAACGTCTACCACTGCACAAACTTCTGGAACATCCATGGATTGTTCAGAACGCAGAGCCCTCTGGTGTATATAAGTGCTAG 894 0.4474 MAIAAETQPQPQPQDKTSSEVSAVENRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSETYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGVYKC 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2210 297 MobiDBLite consensus disorder prediction 1 23 - -
Dere05g2210 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Dere05g2210 297 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 7 295 IPR030616 GO:0004672
Dere05g2210 297 SMART serkin_6 34 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2210 297 SUPERFAMILY Protein kinase-like (PK-like) 20 289 IPR011009 -
Dere05g2210 297 FunFam serine/threonine-protein kinase Aurora-1 118 293 - -
Dere05g2210 297 FunFam Aurora kinase A 26 117 - -
Dere05g2210 297 MobiDBLite consensus disorder prediction 7 23 - -
Dere05g2210 297 CDD STKc_Aurora 33 286 - -
Dere05g2210 297 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Dere05g2210 297 Gene3D Transferase(Phosphotransferase) domain 1 118 294 - -
Dere05g2210 297 ProSiteProfiles Protein kinase domain profile. 34 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2210 297 Pfam Protein kinase domain 36 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2210 297 Gene3D Phosphorylase Kinase; domain 1 22 117 - -
Dere05g2210 297 PIRSF ILK 4 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2210 Dere-ChrDere05 32229084 32231797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2210 25 296 CBL-interacting serine-threonine protein kinases AT5G10930 35.842 2.58e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Dere05g2210 Pkinase 5.5e-74 CL0016