Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2193 ATGGCAAAGTTAGAAGCTCAAAGTAATTTCGCGAAGTCGTTTATGTGCGTGCTCATGTTGATGATGATGATCAACTTTGAGGTATCCCATGGGGAAGAAGAACATGAGCTTTTGTTATCCTTCAAGGCTTCCATCAACGACCCACTTCGCTATCTCTCCAACTGGGTCGATTCCAAGACTGTGTGCCACTGGTATGGCATCACCTGCGACAACAACTCCCACGTTCATGCCATCGACCTCTCGGCCAAAAACATCTCCACCAATATTGTTTCCTCCTTCTCCTTCATATTTCAACTTCCACACGTTCAACACATCGACCTCTCCAATAACCAGCTCTCTGGGGGAATCAATAATTTGACCTCTCCTTCTGTCTCCTCGCTTACCCATCTCAATCTCAGCAACAACAATTTCACGGGCTCGTTGCCACGAGGTTTGCTAACGGTGTCGTTTTCCCGCATCCAAACTCTGGATCTCTCAAACAACATGTTTTCCGGGGAAATACCCCACCAAATTGGATTGCTTTCCAGCCTAAGGTATCTTGATCTGGGAGGCAATGTTTTGGTGGGAAAGATTCCGGATTCTGTCACCAACATGACAGGTTTAGAGTACTTGACTTTGGCTTCCAATCAGCTTGTGGGTGGAATCACTCCAAAAATAGGCCTATTGAAGGGGTTGAAGTGGATTTACTTTGGGTACAACAACCTATCGGGTGAGATTCCAGAGGGAATCGGTGAATTGATGTCTTTGAATCATCTCGATCTTGTCTACAACAACCTCACGGGACAAATTCCCCAGTCTCTCGGAAACCTCGTTAATCTTGAGTATCTTTTTCTCTACCAAAACAAGCTCACAGGTCCAATTCCCCGATCCATTTTTGAGCTTAAAAAGCTTATTTCGCTGGATCTCAGTGATAATTTCCTGTCCGGTGAGATTCCTGAGCCTGTGATACAGCTCCAGAGACTAGAGATTCTTCACCTTTTCTCCAACAACTTAACCGGCGCGCTTCCAAAAGCTATAGCTTCTCTGCCTCGCCTTCAAGTCCTACAGCTATGGTCCAACGGACTAACGGGTGAGATTCCAAATAATCTGGGAAAGCATAACAACCTCACTGTTCTGGACCTGTCCACCAACAAACTTTCCGGGAAAATCCCAGATAGCCTATGCGACTCTGGCACTCTATACAAGCTTATCCTTTTCTCTAACTCTCTGCAAGGCCAAATCCCAAACAGCTTATATTCTTGTACAAGCTTGCGCCGAGTTCGTCTTCAGAACAACAAGCTCTCTGGCGAATTGCCGTCCCAACTAACTCAACTGTCACACGTATATTTTTTGGACATCTCCGGTAACCAACTGTCGGGCAGGATTGACGATAGGAATTGGAATCTGCCGTCGCTTCAAATGTTGAACTTGGGTATCAACAATTTCTCCGGTGAGTTGCCACCCACCTTTGGGAGCGAAAAATTGGAGAAATTGGACTTATCCGAAAATCAGTTTTCGGGTTATATGCCACGTGGGTTTGGAAGCTTATCAGAGCTGATGCAATTGAAGCTCAGCAATAACAAGCTATATGGTAAAATTCCTGAAGAGCTCGCTTTCTGCAAGAAGCTAGTAGTTTTAGATGTCAGCCACAATCAGCTTAGTGGTCAAATTCCAACCTTTCTCGGCGACATGCCGGTTCTGAGCTTGCTTGATTTGTCGGATAACCAATTGTGGGGTAAAATTCCAGAGAATTTAGGCATAGTGGAATCACTTGTTCAGGTAAACATATCCCACAACCACTTTCATGGACATTTACCGGCCACCGGAGCTTTCCTTGCTATTAATGCAAGCGCGGTCGCCGGCAACGACCTATGTGGCCGTCCCGGTTACACTTCATGCGGATTGCCACCGTGCAAAAAAAGCGATAAGATTCCAAGTTGGTGGCTTATTGTACTGTGCTTTGTAGTGGGGTTAGCTGGTTTTGCATTGGCAGTTTTTGCGATCGTTTATGCCCGTAGAAGAAAGAGTTTGGTGCTAAAGAGAGTGGAAAGCGAAGATGGGATCTGGGAAATGCAATTTTTCGATTTGAAGGCCGCCAAGTTGATCACTATGGACGATGTTTTGTCGTCGGCGAAAGCAGGAAATGTGATTTCCGAAGGGAAGAACTGGGTTTCATACGAAGGGAAGTGCATGGCAAACGATGACATGCAATTCGTGGTGAAGGAAATAAGTGACTTAAATTCAGTTCCGTTGAGCTTTTGGGACGACATGGTGGAGTTGGGTATGGTTCGGCATCCAAACGTCGTGAAATTGATGGGAATATGTCGGTCCGGTAAGGGAGCGTTTTTGGTGCGCGAGTATGCAGAGGGGAAGAATTTAAGCCAAGCTTTGAGGAATTTGAGCTGGGAAAGGCGACGGAAAATTGCCGTTGGGATTGCAAAAGCACTAAAGTTTCTGCATGCTCATTGCTCAACTATTTTGGTTGGCGATATGTCACCGGAGAGAGTTGTCGTCGATGACAATGACGTTCCTCGCTTGAAGTTGAGCCCTCCGGGATTGGTTAAGGGTTTCATTTCTTCCACCTACGTTGCCCCAGAAGCAAGGAATGGGAAGGAAGTGACAGAGAAGAGCGAGATATATGGGTTTGGGCTTATTTTGATCGAACTGTTAACGGGAAGAAGTCCGGTGGACACAGAGGAGAGCATGGTGGAGTGGGCCCGGTATTGCTATTCGGATTGTCATTTGGATACGTGGGTCGACCCGATTATGAATGGTGGGTGCCAGAACGACATCGTTGAGACCATGAACCTGGCGCTGCACTGCACCGCCATTGATCCCACTGCTAGGCCATGCGCAAGCGACGTCTTCAAAACCCTATCTTCGGTTTCCTGCAGACCCACTGTTCCCTGTGTTTCTGCTCTCAATCCCTGA 2910 0.467 MAKLEAQSNFAKSFMCVLMLMMMINFEVSHGEEEHELLLSFKASINDPLRYLSNWVDSKTVCHWYGITCDNNSHVHAIDLSAKNISTNIVSSFSFIFQLPHVQHIDLSNNQLSGGINNLTSPSVSSLTHLNLSNNNFTGSLPRGLLTVSFSRIQTLDLSNNMFSGEIPHQIGLLSSLRYLDLGGNVLVGKIPDSVTNMTGLEYLTLASNQLVGGITPKIGLLKGLKWIYFGYNNLSGEIPEGIGELMSLNHLDLVYNNLTGQIPQSLGNLVNLEYLFLYQNKLTGPIPRSIFELKKLISLDLSDNFLSGEIPEPVIQLQRLEILHLFSNNLTGALPKAIASLPRLQVLQLWSNGLTGEIPNNLGKHNNLTVLDLSTNKLSGKIPDSLCDSGTLYKLILFSNSLQGQIPNSLYSCTSLRRVRLQNNKLSGELPSQLTQLSHVYFLDISGNQLSGRIDDRNWNLPSLQMLNLGINNFSGELPPTFGSEKLEKLDLSENQFSGYMPRGFGSLSELMQLKLSNNKLYGKIPEELAFCKKLVVLDVSHNQLSGQIPTFLGDMPVLSLLDLSDNQLWGKIPENLGIVESLVQVNISHNHFHGHLPATGAFLAINASAVAGNDLCGRPGYTSCGLPPCKKSDKIPSWWLIVLCFVVGLAGFALAVFAIVYARRRKSLVLKRVESEDGIWEMQFFDLKAAKLITMDDVLSSAKAGNVISEGKNWVSYEGKCMANDDMQFVVKEISDLNSVPLSFWDDMVELGMVRHPNVVKLMGICRSGKGAFLVREYAEGKNLSQALRNLSWERRRKIAVGIAKALKFLHAHCSTILVGDMSPERVVVDDNDVPRLKLSPPGLVKGFISSTYVAPEARNGKEVTEKSEIYGFGLILIELLTGRSPVDTEESMVEWARYCYSDCHLDTWVDPIMNGGCQNDIVETMNLALHCTAIDPTARPCASDVFKTLSSVSCRPTVPCVSALNP 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2193 969 SUPERFAMILY L domain-like 340 599 - -
Dere05g2193 969 Gene3D Ribonuclease Inhibitor 390 632 IPR032675 -
Dere05g2193 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 189 951 - -
Dere05g2193 969 SMART LRR_typ_2 222 246 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 557 581 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 318 341 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 414 438 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 462 485 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 99 122 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 342 366 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 486 508 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 509 533 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 368 390 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 174 198 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 270 294 IPR003591 -
Dere05g2193 969 SMART LRR_typ_2 124 148 IPR003591 -
Dere05g2193 969 SUPERFAMILY RNI-like 78 377 - -
Dere05g2193 969 Pfam Leucine Rich Repeat 126 145 IPR001611 GO:0005515
Dere05g2193 969 Pfam Leucine Rich Repeat 368 388 IPR001611 GO:0005515
Dere05g2193 969 Pfam Protein kinase domain 724 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2193 969 Gene3D Phosphorylase Kinase; domain 1 668 780 - -
Dere05g2193 969 Gene3D Ribonuclease Inhibitor 148 215 IPR032675 -
Dere05g2193 969 Gene3D Ribonuclease Inhibitor 315 388 IPR032675 -
Dere05g2193 969 Gene3D Ribonuclease Inhibitor 33 147 IPR032675 -
Dere05g2193 969 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Dere05g2193 969 Pfam Leucine rich repeat 248 305 IPR001611 GO:0005515
Dere05g2193 969 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Dere05g2193 969 Pfam Leucine rich repeat 487 546 IPR001611 GO:0005515
Dere05g2193 969 Gene3D Ribonuclease Inhibitor 216 314 IPR032675 -
Dere05g2193 969 FunFam Leucine-rich repeat receptor-like protein kinase 31 193 - -
Dere05g2193 969 FunFam Leucine-rich receptor-like protein kinase family protein 215 313 - -
Dere05g2193 969 SUPERFAMILY Protein kinase-like (PK-like) 698 952 IPR011009 -
Dere05g2193 969 ProSiteProfiles Protein kinase domain profile. 648 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2193 969 Gene3D Transferase(Phosphotransferase) domain 1 782 960 - -
Dere05g2193 969 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 668 780 - -
Dere05g2193 969 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 324 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2193 Dere-ChrDere05 32060639 32063837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2193 14 952 Receptor kinase-like Gene Family AT2G25790 54.232 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Dere05g2193 Pkinase 2.1e-19 CL0016