Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2192 ATGGGAGCAGCTCATTTTGAAGGGATGATGGCGGTGAGTTCGACCTGCAAAGATGGGATGAAGGTGGTAATGGACAACGGCAAGTACGTGCGGTACACACCGGAGCAAGTGGAGGCTCTGGAGAGGCTATATTACGAATGCCCCAAACCCAGTTCCATCCGCCGTCAGCAGCTCATCAGAGAGTGCCCCATTCTCTCTAATATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGCGGAAAGAAGCTTCACGCCTACAAGCCGTAAACAGGAAACTGACGGCTATGAATAAACTGCTGATGGAGGAAAACGACAGATTGCAGAAACAAGTGTCACAGCTGGTTTACGAGAACAGCTTTTTCCGCCAACAGACTCAGAATGCAACACTTGCAACCACGGACACAAGTTGCGAGTCTGTGGTGACCAGCGGTCAGCACCATTTGACACCTCAGCATCCACCCCGGGATGCCAGCCCAGCTGGACTTTTGTCCATTGCAGAGGAGACTCTTGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCCATTTCTCATGGTTGCCCTGGAGTGGCAGCACGTGCCTGCGGCCTTGTGGGTCTGGAACCCACGAGAGTCGCTGAAATCCTCAAAGATCGGCCGTCATGGTGTCGTGATTGCCGAGCTGTGGATATTCTAAATGCCATGCCCACTGGAAATGGGGGAACCATTGAACTGCTTTACATGCAGTTGTATGCGCCAACAACTTTGGCACCGGCTCGTGACTTTTGGTTGCTGCGCTACACTTCTGTTTTGGAGGACGGTAGTCTTGTGGTCTGTGAAAGATCGCTTAACAACACTCAGAATGGTCCTACTATGCCACCAGCACAGCATTTTGTACGAGCTGACATGCTGCCAAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCTATCATTCACATTGTTGATCACATGAACTTAGAGCCATGGAGTGTACCTGAAGTGTTACGCCCACTATATGAGTCATCAACGTTGCTTGCTCAAAAGACAGCTATGGCGGCTTTACGTCATCTGAGGCAAATTTCTCAAGAAGTTTCTCAGCCAAATGTCACGGGATGGGGAAGAAGGCCTGCAGCACTTCGAGCACTGAGTCAGCGTTTGAGCAAGGGTTTCAATGAAGCCATCAATGGGTTTGTAGACGATGGCTGGTCCATGTTAGAAAGTGATGGCATAGATGATGTTACCCTTCTTGTGAATTCATCTCCTAGCAAGATGCTGGGAGCGAATCCTGGTTATAACAATGGATTTCTTTCGCTAAGCAGTTCCATACTATGTGCCAAAGCATCCATGTTGTTACAGAATGTCCCTCCAGCAATTCTTCTTAGATTCTTGCGGGAGCATCGATCAGAATGGGCAGATAGCAGTATCGATGCTTACTCAGTTGCCGCCATCAAAGCTGGGCCCTGTACCTTGCCAGGGGTCCGAGCAGGAGGTTTTGGCGGTCAAGTTATTCTTCCACTGGCTCACACAATTGAGCATGAAGAGTTTATGGAGGTCATTAAGCTTGAAAATATGGGATACTATCGAGAGGACATGACTATTCCTGGTGATATATTCCTCTTGCAACTTTGCAGTGGAGTGGATGAGCGTGCAGTTGGCACCTGCGCAGAACTCATTTTTGCTCCCATTGATGCATCTTTCTCTGATGATGCACCCATTTTACCCTCTGGTTTTCGTATCATACCTCTTGATTCAGGCATGGATGCTGCTACTCCAAACCGTACACTTGACCTTGCTTCTGCTCTTGAAGTTGGAACCACCGGAAACAAATCAGCTGGTGACAATTTTGGTCATTCTGGAAGCACAAAATCTGTGATGACAATTGCATTCCAGTTTGCATTTGAAGTCCACCTTCAAGATAATGTAGCAACTATGGCCCGGCAGTATGTTCGGAGTATTATTGCATCTGTTCAGAGGGTTGCACTCGCACTCTCCCCTTCACGCCTTGGCTCCCAAAATGGTCTTCGCCCACCACCTGGCACTCCTGAGGCACAAACACTTGCTCAGTGGATCTGTAATAGCTATAGGTGCTATCTAGGGGCAGAACTACTAAAATGCGAAGGCAGTGAATCCATTCTCAATTCCCTTTGGCATCACTCCGATGCAGTTTTGTGCTGCTCTTTAAAGGCTATGCCAGTTTTTACATTTGCAAATCAGGCTGGACTTGACATGCTTGAGACAACCTTGGTTGCTCTTCAAGACATCACTCTTGATAAAATTTTTGACGAGAATGGAAAGAAAACCTTGTTCTCTGAGTTCCCCCAGATAATGCAGCAGGGTTTTATGTGTATCCCAGGAGGTATCTGTTTGTCCAGCATGGGGAGGCCAGTGTCTTATGAGAGAGCAGTGGCATGGAAAGTATTGAACGAAGAAGAAACAGCTCATTGCATCTGTTTTATGTTCATCAACTGGTCTTTTGTCTGA 2544 0.4796 MGAAHFEGMMAVSSTCKDGMKVVMDNGKYVRYTPEQVEALERLYYECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNATLATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWCRDCRAVDILNAMPTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTMPPAQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSTLLAQKTAMAALRHLRQISQEVSQPNVTGWGRRPAALRALSQRLSKGFNEAINGFVDDGWSMLESDGIDDVTLLVNSSPSKMLGANPGYNNGFLSLSSSILCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSVAAIKAGPCTLPGVRAGGFGGQVILPLAHTIEHEEFMEVIKLENMGYYREDMTIPGDIFLLQLCSGVDERAVGTCAELIFAPIDASFSDDAPILPSGFRIIPLDSGMDAATPNRTLDLASALEVGTTGNKSAGDNFGHSGSTKSVMTIAFQFAFEVHLQDNVATMARQYVRSIIASVQRVALALSPSRLGSQNGLRPPPGTPEAQTLAQWICNSYRCYLGAELLKCEGSESILNSLWHHSDAVLCCSLKAMPVFTFANQAGLDMLETTLVALQDITLDKIFDENGKKTLFSEFPQIMQQGFMCIPGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2192 847 CDD bZIP 80 119 - -
Dere05g2192 847 SUPERFAMILY Bet v1-like 171 383 - -
Dere05g2192 847 Pfam Homeodomain 28 86 IPR001356 GO:0003677
Dere05g2192 847 Coils Coil 83 124 - -
Dere05g2192 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 23 847 IPR044830 GO:0003700
Dere05g2192 847 Pfam START domain 172 380 IPR002913 GO:0008289
Dere05g2192 847 Gene3D - 206 386 IPR023393 -
Dere05g2192 847 SMART START_1 171 381 IPR002913 GO:0008289
Dere05g2192 847 SUPERFAMILY Homeodomain-like 27 91 IPR009057 -
Dere05g2192 847 FunFam Homeobox-leucine zipper protein REVOLUTA 28 83 - -
Dere05g2192 847 ProSiteProfiles START domain profile. 162 390 IPR002913 GO:0008289
Dere05g2192 847 CDD START_ArGLABRA2_like 166 381 - -
Dere05g2192 847 Gene3D - 22 94 - -
Dere05g2192 847 SMART HOX_1 25 91 IPR001356 GO:0003677
Dere05g2192 847 Pfam MEKHLA domain 706 846 IPR013978 -
Dere05g2192 847 CDD homeodomain 28 88 IPR001356 GO:0003677
Dere05g2192 847 ProSiteProfiles 'Homeobox' domain profile. 23 87 IPR001356 GO:0003677
Dere05g2192 847 FunFam homeobox-leucine zipper protein ATHB-15 207 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2192 Dere-ChrDere05 32046735 32054320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2192 24 847 Homeobox Transcription Factor Family AT4G32880 81.522 0.0 1414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere05g2192 START 2.1e-52 CL0209