Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2174 ATGGAAAAGCCCTGGTCTTTCGTCCATATTGTCGGCACGCTGTGTTTGTGTATTCTCCTCTTGTCTGAATTATGTCGGGCTGGTATTCAAACCGTTGGCAAGATCCTGCCAGGTTTTCAAGGCTCACAGATGAATTGGATCGACAAAAATGGCATGTTTCTCCTGTCGAAGAATGGAAATTTTGCGTTTGGCTTCTTGACTACGAAGGACATCACATTGTTTCTTCTAGCAATCGTCCACAGCGACAGTTCCAAAGTGGTTTGGACAGCAAACAGAGGACTCCCCGTTGGTAATTCCGATGATTTTGTGTTTGATAAAACCGGTAATGTCTTCTTACAGAAAGGAGGCACCGTAGTTTGGTCTACAAGTACGAAGGGAAAAGGAGTTTCTTCAATGGAATTACAGGACACAGGAAACTTGGTTTTACTTAGGAACGACAGTAGTATAATTTGGCAGAGTTTCAGCCATCCAACTGATACATTATTGCCAATGCAGGAATTCACCGAGGGAATGAAACTCATCAGTGAACCTAGCCCCAGTAACTTGACCTACGTTCTTGAGATCAAATCTGGTGATGTACTTCTCTCTGCTGGTTTTCAAAACCCACAGCCTTATTGGTCTGTGCAGAAAGATAATCGCAAAATCATCAATAAAGATGGTAACGCGGTGGCTTCAGCTTCCCTCAATGCAAATTCTTGGAGGTTCTATGATGAAGACAAATCCTTCTTATGGCAGTTGATTTTTGCTCCAGATTCATCAGGCGCAAATTCCACTTGGGTCGCTGTTCTGGGAAGTAATGGTTTCATCACTTTCTCTAATCTCAATGGTGGAGATTCAAGTGGTACCTCGCCAACAGAAATCCCAGAAGATTCTTGCAGTACACCTGAGCCTTGTGATCCTTATTACATATGCACTGGTGATAACAAGTGTCGTTGCCCTTCTTCTCTTAGCTCTCGTCCCAATTGCAAACCAGGGGTTGTCTCGACCTGTGATGACTCAAAGAAATCTGTAGTGCTCGTGGAAGGCGATGATGGACTCAATTACTTCGCGCTTGGATTCCTTCCACCAACTTCCAAAACTGATTTGAATGGCTGCAAGGCTTCCTGCCTAGGAAATTGCTCGTGTCTTGCGATGTTCTTCCACAGCAATACAGGAAACTGTTTCCTGTTGGATAGTATAGGAAGCTTTGAGAATTCTGATGCAAAATCTGGTTTTGTTTCTTACATCAAGGTCTCGAGTGATGAAGACACTGGCACCGCTGGGGGCAGTGGAAGCAGCAATAAGCACACTGCGGTCGTTGTGGTTATTGTCATAATAACTTTGCTTGTCATTATGGGTTTACTCTATGTGGGACTTCGATGCTACAGGAGAAAGCAAAAATTGCCCGAGTCTCCAATAGGGAGTGCAGAAGAGGACAATTTCTTGGAGAATTTCCCTGGAAGGCCTGTCCGTTTCAGCTACAAGGATCTGGAAACTGCAACTAAGAACTTCTCTGAGAAGCTTGGGCACGGAGGTTTTGGCTCAGTTTATAAAGGAGTTCTACCAGATGGGACTCTACTAGCTGTGAAGAAGCTGGAAGGCATAGGCCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGCAGCATTCATCATCTCCATTTGGTCAAGCTAAAGGGATTCTGTGCTGAAGGAACCCATCGCCTTCTCGCCTATGAGTATATGGCAAATGGCTCATTGGACAAATGGATATTCAAGAAAAATCAAGGAGAATTCTTGTTGGATTGGGATACGAGGTTTAATATAGCTCTGGGAACAGCAAAGGGGCTTGCATACCTGCATGAGGATTGTGATTCAAAGATCATTCATTGTGACATCAAACCAGAAAATGTGCTTCTTGATGATAGTTTCCATGCCAAAGTTTCAGATTTTGGTTTGGCTAAACTCATGACTCGCGAGCAAAGCCATGTTTTCACGACACTAAGAGGAACCAGGGGATATCTCGCACCAGAGTGGATCACAAACTATGCTATATCAGAGAAAAGTGATGTATATAGCTACGGGATGGTGTTGCTGGAGATCATTGGGGGAAGGAAAAACTATGATCCTACCGAGACCTCAGAGAAATCCCACTTCCCGTCGTATGTTTTCAGGATGATGGAAGAAGGGAAGTTGAACGATATTCTTGATTCAGAGTTGAGAATAGATAGAAATGATGAAAGGTTTCCAGTTGCCATCAAAGTTGCATTGTGGTGCATACAGGAAGATATGTCCCTGAGGCCTTCCATGACCAAAGTTATTCAGATGCTTGAGGGTCTATGTACTGTTCCTAAGCCACCATCATCTTCTCCCATGGGTTCTCGCCTTTACTCATCTTTATTCAAATCTATAAGCGAAGGTGGCACCTCTTCAGGACCATCAGACTCTAATAGTGATGCTTATCTCTCTGCAGTCAGGCTTTCCGGACCAAGATAA 2460 0.4398 MEKPWSFVHIVGTLCLCILLLSELCRAGIQTVGKILPGFQGSQMNWIDKNGMFLLSKNGNFAFGFLTTKDITLFLLAIVHSDSSKVVWTANRGLPVGNSDDFVFDKTGNVFLQKGGTVVWSTSTKGKGVSSMELQDTGNLVLLRNDSSIIWQSFSHPTDTLLPMQEFTEGMKLISEPSPSNLTYVLEIKSGDVLLSAGFQNPQPYWSVQKDNRKIINKDGNAVASASLNANSWRFYDEDKSFLWQLIFAPDSSGANSTWVAVLGSNGFITFSNLNGGDSSGTSPTEIPEDSCSTPEPCDPYYICTGDNKCRCPSSLSSRPNCKPGVVSTCDDSKKSVVLVEGDDGLNYFALGFLPPTSKTDLNGCKASCLGNCSCLAMFFHSNTGNCFLLDSIGSFENSDAKSGFVSYIKVSSDEDTGTAGGSGSSNKHTAVVVVIVIITLLVIMGLLYVGLRCYRRKQKLPESPIGSAEEDNFLENFPGRPVRFSYKDLETATKNFSEKLGHGGFGSVYKGVLPDGTLLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLKGFCAEGTHRLLAYEYMANGSLDKWIFKKNQGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDSFHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPTETSEKSHFPSYVFRMMEEGKLNDILDSELRIDRNDERFPVAIKVALWCIQEDMSLRPSMTKVIQMLEGLCTVPKPPSSSPMGSRLYSSLFKSISEGGTSSGPSDSNSDAYLSAVRLSGPR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2174 819 MobiDBLite consensus disorder prediction 793 819 - -
Dere05g2174 819 Gene3D - 45 157 IPR036426 -
Dere05g2174 819 ProSitePatterns Protein kinases ATP-binding region signature. 501 524 IPR017441 GO:0005524
Dere05g2174 819 CDD PAN_AP_plant 357 412 - -
Dere05g2174 819 MobiDBLite consensus disorder prediction 793 811 - -
Dere05g2174 819 Pfam Protein kinase domain 498 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2174 819 FunFam serine/threonine-protein kinase PBS1-like 466 569 - -
Dere05g2174 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 45 776 - -
Dere05g2174 819 CDD B_lectin 47 157 IPR001480 -
Dere05g2174 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 175 IPR036426 -
Dere05g2174 819 ProSiteProfiles Protein kinase domain profile. 495 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2174 819 ProSiteProfiles PAN/Apple domain profile. 330 413 IPR003609 -
Dere05g2174 819 SMART blect_4 45 157 IPR001480 -
Dere05g2174 819 FunFam S-receptor-like kinase 5 570 774 - -
Dere05g2174 819 SMART serkin_6 495 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2174 819 FunFam Serine/threonine-protein kinase 41 155 - -
Dere05g2174 819 SUPERFAMILY Protein kinase-like (PK-like) 476 766 IPR011009 -
Dere05g2174 819 Pfam D-mannose binding lectin 86 167 IPR001480 -
Dere05g2174 819 ProSiteProfiles Bulb-type lectin domain profile. 39 155 IPR001480 -
Dere05g2174 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Dere05g2174 819 PIRSF SRK 7 815 IPR024171 GO:0004674
Dere05g2174 819 Gene3D Transferase(Phosphotransferase) domain 1 570 773 - -
Dere05g2174 819 CDD STKc_IRAK 501 768 - -
Dere05g2174 819 Gene3D Phosphorylase Kinase; domain 1 466 569 - -
Dere05g2174 819 Gene3D Hepatocyte Growth Factor 347 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2174 Dere-ChrDere05 31878300 31880759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2174 441 777 Receptor kinase-like Gene Family AT5G20050 46.369 1.74e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere05g2174 Pkinase 7e-51 CL0016