Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2173 ATGACTTCAATTCTCTCCGTCTCTCACCATTCTCTACTTTGTTCAACTGTTTCATCTTCCTTCTCCGAAACCAATTTTCCCGCCAAATCACAACGGCCTTCTTCATCGACGGCCAAATTTCGCTCGCACAAGGCCAACGAGTTCGCTTCAGGTCAAGTAGGCGTATCGGCTCCAACTAGCAGAAGGAAAGGGCTTCTATTTATAGCCACACTTCCATGCCTTCTTCCCTTAACTCAAATTATGGATTGGCATGGAGCAAACGCAATCGAGCCAGGTACAAAGGAATATCTGCTCATAAAAGAAGAGATTGGCAAGGTATTATCGAAAGGAAAGGCAGCGGGTGTGCTTCGTTTGGTTTTCCACGATGCTGGGACCTTTGAAATGGATGATAATAAAGGTGGCATGAATGGTTCTATAGTCTATGAACTTGAAAGACCTGAAAATTCTGGACTCAAGAAGTCTATAAAGATTCTCCAGAAAGCAAAGTCTCAAATAGATGCTACAAAACCAGTATCCTGGGCAGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGCAGTATGTGGAGGACCGAAGATTGAAGTTTCACTTGGCAGGCTAGATTCATTGGAGCCTGATCCTGAAGGGAAACTTCCTGAGGAAACTCTCAATGCTTCTGGTTTGAAGAAATGTTTCCTGAGAAAAGGCTTTTCAACACAAGAACTTGTAGCATTGTCTGGAGCCCACACACTTGGAAGTAAAGGTTTTGGAAACCCAACTTCTTTTGACAATTCATATTATAAGGTTCTTCTGGAGAAGCCATGGATGTCTTCAGGCAGTATGTCAAGTATGATTGGCCTTCCTTCAGATCACGCACTTGTTGAGGATGATGAATGCTTAAGGTGGATTAAAAAATACGCAGACAATGAGAATATGTTCTTCGAAGATTTCAAGAATGCGTATGTCAAGCTGGTGAATTCTGGGGTGACGTGGAAAAGCTTATAA 984 0.4299 MTSILSVSHHSLLCSTVSSSFSETNFPAKSQRPSSSTAKFRSHKANEFASGQVGVSAPTSRRKGLLFIATLPCLLPLTQIMDWHGANAIEPGTKEYLLIKEEIGKVLSKGKAAGVLRLVFHDAGTFEMDDNKGGMNGSIVYELERPENSGLKKSIKILQKAKSQIDATKPVSWADMIAVAGAEAVAVCGGPKIEVSLGRLDSLEPDPEGKLPEETLNASGLKKCFLRKGFSTQELVALSGAHTLGSKGFGNPTSFDNSYYKVLLEKPWMSSGSMSSMIGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYVKLVNSGVTWKSL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2173 327 Gene3D - 100 321 - -
Dere05g2173 327 ProSitePatterns Peroxidases active site signature. 112 123 IPR019794 GO:0004601
Dere05g2173 327 ProSiteProfiles Plant heme peroxidase family profile. 112 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 FunFam Adenylate/guanylate cyclase 212 314 - -
Dere05g2173 327 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 96 325 IPR044831 GO:0004601|GO:0034599
Dere05g2173 327 Pfam Peroxidase 109 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Plant ascorbate peroxidase signature 210 227 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Plant ascorbate peroxidase signature 130 140 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Plant ascorbate peroxidase signature 228 249 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Plant ascorbate peroxidase signature 298 322 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Plant ascorbate peroxidase signature 189 201 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Plant ascorbate peroxidase signature 170 188 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Plant ascorbate peroxidase signature 112 127 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 234 244 IPR019793 -
Dere05g2173 327 PRINTS Haem peroxidase superfamily signature 171 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Haem peroxidase superfamily signature 189 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 PRINTS Haem peroxidase superfamily signature 112 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 FunFam L-ascorbate peroxidase 102 219 - -
Dere05g2173 327 SUPERFAMILY Heme-dependent peroxidases 110 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere05g2173 327 Gene3D Peroxidase, domain 2 212 314 - -
Dere05g2173 327 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2173 Dere-ChrDere05 31872431 31876010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2173 112 317 Peroxidase AT4G16270 31.439 9.49e-24 98.2