Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2159 ATGCTGGTGCTTTTGTGTCTCTCTGCCTTGCTTGTTGAAACTTGTTCAAGCTCTTTGACAGGCCTCGACACTTTCTCTTTTCCTTCGTTTAGCCCTGAAAGTTGCAGCAATGGCGAGCTGATGTGCATGGGGTCGGTGACGTCAGGTGATGGGTATATAAGCCTGACTCCAGAGCCAAATTCAAGTCTTGTGTCGTCCTCCACGGTGAACACAGTAGGGAGGGTGTTGTACCCTCAAAGGGTTCGAGTTTGGCCAGCGTATATCAGCACCACCTTCACCATCAGGATCACTCCAATGCCTAATTCAAGCAGATCTGGTGATGGTATGACATTCATTTTTGCACAAGATCATAACCCCTCACCACCTAATAGCTATGGCGCATCTCTTGGCTTATTTGATAGGTCTACTCAAGGTGGGCTTTTACAACAAATAGCTGTGGAGTTAGATACTTTCATGAACGAGTTTGATCCTGATGGAAACCACATTGGGATAGACACAAGAAGCATCACAGATCCAGTTGTTGCAGTGAGTCTCAATGGCTCTGATGTTGAACTCAAAAGTGGAAGAGACATTGAGGTTAAAATAGAGTACGATGGTTCCATTAGTATGCTCTATGTCTCTATTGGGTACTCCAAAAGCCAGTTAAAGAGCGTTCTTAACCACTCAATTGCTTTGTCGAACATAGTACCAAGCACCGTTTATGTTGGTTTCACAGCCTCCACTGGCGATGCTTTGCCTCAAAGCCATAGAGTTATCCATTGGGTGTTCGCATCAGTGCCTCTGCCCATGCCTTCTGATGAACTCAGTAAACATAAGACCATTAAGACCGTACTGATCATTGTCATACCTATTTTTCTGGTCATGTTGATAAGCTCGGTTCTACTTATTCGGGAAGCTTGTTCGAAGAGAAGAGATGAAAGGCGTGACAAGCAAGAAGATATAGAAAGCTTATCCATGACAGTTGCAGATATTCCCAAGGTGTTCGCTTTCAACCAATTGTCTAAAGCTACAAGCAACTTTAGCAAGGAGAATCTTTTAGGCAGAGGCGGATTTGGTAGTGTTTATAAAGGCCTCCTATTAAATCCCCCAAAAACCATTGCAGTCAAGAAGATTTCTGCAACCTCCAAACAAGGTGAAAGAGAGTATTTGGCTGAAATATGTACCATAGGACGACTAAGGCACAGGAACATAGTACAGCTGCTAGGTTGGTGCCATGAACGTGAACATCTTCTCCTAGTGTATGAGTACATGCAAAATGGAAGCCTGGATCGCTTCATAGGCAAGGATATTCTGGACTGGCAAACAAGGCACAAGATATTAACAGGACTTGCATCAGCATTACTCTACCTTCACGAAGAGTGTGGAAACCCTGTTGTTCACAGAGACGTTAAACCAAACAATGTGATGCTAGATGCTAATTACAACGCTCATCTAGGAGATTTTGGGCTTGCAAGACTGCTCCAAAACGAAGAATCAGTTATCACAAATCTAGCAGGAACTCCTGGATATTTGGCCCCTGAAATAGGCTTCACGGGGAAAGCCACCCCAGAATCAGATGTATACAGCTTTGGAATGGTAGTGCTGGAAGTCATATGTGGGAGAAGGTCAAAGAGCACCATGGAAGAGAACAGTTTGGTAGACTACGTTTGGAATATGCACACCGAGAATGCATTGACTGAGTGTATTGATAAACTCCTGGGCGACCAATTTGACGAGGAAGAAGCTAAAAGGGCATTGATGGTTGGGCTGGCTTGTTTGCATCCTGATTCGGCGTTCAGGCCGAGGATGAGAAAAGTGTTGCACATTTTGCTGAACCCTAATGAGCCTCTAATGGAATTACCAGGAATAAGACCTGCTGGTGTTTACGTGTCAGTGTCTTCATCTACATCAACTACTAACTTTGGATCCAGAAGTGCGTATCCATGTCCGGTGCTTCAATCAGGCGCAACATCATCGGACGAAATGACAATTGTGTATGATCAGGATCAGCAGTGA 1995 0.4441 MLVLLCLSALLVETCSSSLTGLDTFSFPSFSPESCSNGELMCMGSVTSGDGYISLTPEPNSSLVSSSTVNTVGRVLYPQRVRVWPAYISTTFTIRITPMPNSSRSGDGMTFIFAQDHNPSPPNSYGASLGLFDRSTQGGLLQQIAVELDTFMNEFDPDGNHIGIDTRSITDPVVAVSLNGSDVELKSGRDIEVKIEYDGSISMLYVSIGYSKSQLKSVLNHSIALSNIVPSTVYVGFTASTGDALPQSHRVIHWVFASVPLPMPSDELSKHKTIKTVLIIVIPIFLVMLISSVLLIREACSKRRDERRDKQEDIESLSMTVADIPKVFAFNQLSKATSNFSKENLLGRGGFGSVYKGLLLNPPKTIAVKKISATSKQGEREYLAEICTIGRLRHRNIVQLLGWCHEREHLLLVYEYMQNGSLDRFIGKDILDWQTRHKILTGLASALLYLHEECGNPVVHRDVKPNNVMLDANYNAHLGDFGLARLLQNEESVITNLAGTPGYLAPEIGFTGKATPESDVYSFGMVVLEVICGRRSKSTMEENSLVDYVWNMHTENALTECIDKLLGDQFDEEEAKRALMVGLACLHPDSAFRPRMRKVLHILLNPNEPLMELPGIRPAGVYVSVSSSTSTTNFGSRSAYPCPVLQSGATSSDEMTIVYDQDQQ 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2159 664 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Dere05g2159 664 FunFam serine/threonine-protein kinase PBS1-like 305 416 - -
Dere05g2159 664 PANTHER - 60 605 - -
Dere05g2159 664 CDD STKc_IRAK 346 603 - -
Dere05g2159 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Dere05g2159 664 CDD lectin_legume_LecRK_Arcelin_ConA 25 258 IPR001220 GO:0030246
Dere05g2159 664 FunFam probable L-type lectin-domain containing receptor kinase S.5 417 611 - -
Dere05g2159 664 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Dere05g2159 664 ProSiteProfiles Protein kinase domain profile. 340 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2159 664 Gene3D Transferase(Phosphotransferase) domain 1 417 610 - -
Dere05g2159 664 SMART serkin_6 340 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2159 664 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Dere05g2159 664 Pfam Protein kinase domain 341 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2159 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 259 IPR013320 -
Dere05g2159 664 SUPERFAMILY Protein kinase-like (PK-like) 325 626 IPR011009 -
Dere05g2159 664 Gene3D - 22 277 - -
Dere05g2159 664 Pfam Legume lectin domain 24 265 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2159 Dere-ChrDere05 31753875 31757266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2159 72 622 Receptor kinase-like Gene Family AT5G10530 38.937 3.95e-116 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere05g2159 Pkinase 1.8e-48 CL0016