Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2144 ATGCTTGAGTTGGATTATCAAATTTTGGCTTCATTACTAGTTTTCGTTGGCGGGCGTCAACCAGAAAATATGCTTACTGCTATTCTTGTGAGATGGAATCAGGGCAAACTAAATTATTCTGTGGCTGAGTTCGCAGGTTATATATTTTACTATATTCCTGGAAAGATGTCATCAGCTCGGGTTCTTGAAACCATCAATGAATGTCTCTCCCAGGTTGAAGCGGACTCTCCTCGAGCTCAGGAAAAAGCTCTCCGAACTCTGGCTACCATCACCAGGGTCAGTCCTCAAAACAGAACCTTTCTTGCTCAAAAAGATGGGGCAATACCTAAATTAGCCTCACTAACAAACGCTTCTTCCCCAGTTATCCAATCCCTTTCCTTATTGATCCTCTTCAACCTTTCCCTGAACCCTGATCTGAAGCAATCTCTTGCTGATATGGAAACCATTTACCACCTCAACTCTCGTATCACCTCACCGACTTCTCCTGATTCCTCCAAATTAGCCTCCTCATTGATTTGCAGTTTAGCCATGCTTGACAAGAACAAGGCCAAATTAGGAGTAGCAGGTACTGTTCAATTGTTGGTTCATGCGATATCGAGCTCTACTGACTCTGATGCTCATCACCTTTTGAGTTCTTTAGCTGAGCTTGTGCACTTCCATGGGAATAGCACTTTGGCTGTGCGAGCAGGGGCCGTTCCCGTGCTGCTTCGAGTGATTCAACGCACTGAGGTTGAGGACTTAGCTGGAAGTTCTCTTGCTGTTCTTGGTCTACTTGCTAGGTTTAACGAAGGGCTTAGTGCTTTAAAGAACACTGACCAAATACTAAATTGGATGTTACATGTGTTGAGAAGGAGGTCCTTGATGAGTAAGGAAGGAGCAGCTGAGATACTTCGTCGACTTTTTGATGACAGTGAAGAATGTGTCAAAGAGTCTCTAATGATGCCAGAGTTCACAACTGTATTAGCTGATCTTTCGGTGAGGGGTTCAATTAGTGTACGAGAGAAGGCTGATTTGCTTATGAAGAAGATGGCTGAGGTTAACTTAGCCATTACTGCGGAAGAGAGCCCCCTATTCTTTTAA 1080 0.4398 MLELDYQILASLLVFVGGRQPENMLTAILVRWNQGKLNYSVAEFAGYIFYYIPGKMSSARVLETINECLSQVEADSPRAQEKALRTLATITRVSPQNRTFLAQKDGAIPKLASLTNASSPVIQSLSLLILFNLSLNPDLKQSLADMETIYHLNSRITSPTSPDSSKLASSLICSLAMLDKNKAKLGVAGTVQLLVHAISSSTDSDAHHLLSSLAELVHFHGNSTLAVRAGAVPVLLRVIQRTEVEDLAGSSLAVLGLLARFNEGLSALKNTDQILNWMLHVLRRRSLMSKEGAAEILRRLFDDSEECVKESLMMPEFTTVLADLSVRGSISVREKADLLMKKMAEVNLAITAEESPLFF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2144 359 Gene3D - 54 346 IPR011989 -
Dere05g2144 359 SUPERFAMILY ARM repeat 60 328 IPR016024 -
Dere05g2144 359 PANTHER U BOX DOMAIN-CONTAINING 65 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2144 Dere-ChrDere05 31616797 31618412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2144 76 344 U-box Gene Family AT3G46510 25.641 4.85e-15 74.7