Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2143 ATGACAAAGAAGAAGAATCCCCTGGTGTTTATGGATGTCTCTATAGATGGGGATCCTGTTGAAAGGATGATTTTTGAGCTATTCTATGATATTGCTCCCAAGACTGCAGAGAATTTCCGTGCACTATGTACAGGAGAAAAAGGAGTCAGTCCAAGTACTGGAAAGCCACTGCACTACAAGGGTTCTTTCTTCCATCGCATTTTAAAAGGCTCCATTGTGGAGGGGGGTGATTTCGTCAATCGAAATGGTACTGGTGGAGAAAGCATATATGGTTCAAAGTTCCCAGATGAGTCACCTAGGCTTAAGCATGATGCACCAGGTCTTCTATCCATGGCAATTGCTGATCGTGATACTCTTGGTTCTCATTTTATGATCACATTGAAAGCTGATCACCATCATGACAGGAAGCATGTAGTATTTGGGAAGCTTGTTCAAGGGCTTAATATATTGAAGAAGATTGAAGATGTCGGGGATGAGGAAGGGCATCCAACAGTAACTGTCAAAATCATCAATTGTGGTGAATATAATGAGGATGGAAAGAAGACAAATAAATTGACTTCTGATACCAATAATCATGAAGCACGGCGCAAGGGAAAGCACAAAAAATCTTCAAGAGACAGAAGGAAACGGAGAAAAAGATACTACTCGTCTGACTCAGAGAGTTCTTCAGAATCAGACATGGAATCATCAGACTCTGATAGTGATTCTGACTCAGATCTGTCATCGTCATCTTACATAAGTTCTTCCAGTGATGACAGGCGAAAAAAGAGAAAGAGATCTTCTAGGAAAGATAAATATAGACGCCGAAAAAGAAGGGATAGACGTCGTGACAAGAGGCGAAGGAGACGAGATAAAAGATCAAAGCGTAGATCAAGAAGGGAATCAGGCAGTGACACTGATTCAGATAGTGAGAGCAAAAGCGACAGCAGCTCTGATGGTGAAAGTCTTGATGTTAAAGGGAAGGAGCAAAAACGTAAAGATCATTCTCGAAAGAATGCAGCTGAAGTTCAGTCGCCCTTAGCTGGCAATAAAGAAGTACCACACATGCATCATAAAAAAAGGGAAGAAGTGGGTATGCTAGAGAACGAGGAGGAATCACCCAAAGAAAATGGAGAACGGCGTAGCAATGGTATTGGAGCTGACTCTCGATCTGACAGAAGTGAGGAGAGGCAGCCTGATGTGATGGATGATAATCCAGGCAAATCTAGGAGTCGAAGCATGAGTCCCAAGAGGACCATGAGTAAGAGTATGAGTATTAGTCCCAGGAGAAGTGAGAGCAACAGCCCAAGTGCTAGTCCTGAAAGGAAGATGAACAGAAGTCCTAGTGGTAGTAGAAGCCCTTGTGCCCCGTCACGGAGGAGTTTCAGCAGAAGTCCTGCCAGAAGCATCAGTAGGAGCCCAAGCAGAAGCATCAGTAGAAGCCCAGTGAGGGGCAGAAAGGGAAAAAGTGTCAGTAGGAGCCCAGTGAGAACACGCTCTCGTATTAGTGACAGTGAGAGCCCTGTGAGATCCCCATCTCGTAGCCACCGGAGCAGGAGTTCAGCCAGAATATCATCACGAAGATCAGTCAGCAGAAGCCCTGTAAGGGTTTCAAGAAAGAGTATAAGCAAGAGTCCAGTTAGATCCTCTGCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCTTCAAAGAGAGGCATCAGTCGAAGTCCTGTCAGGGCACCTAGCAGAAGCAATCGCCGCAGCTATTCCAGGAGTCCTAGTCCTGTTCATAGGGCAAGGTCACCTCGTGGGAGGAGTTTGTCAAGGAGTGTCTCTCCTGATGCATCCCCAAAGCGTATTAGAAGGGGAAGAGGTTTTAGTGAGCGATACTCTTATGCAAGAAGGTATCGGACTCCCTCCCGATCTCCTGTGAGGTCGTATCGGTACAATGGAAGAAGTGATCGAGACAGATATTCTAGTCACAGAAGGTATTCTCCTAGGCGTTACAGAAGCCCACCCCCTCGAGGAAGAACTCCACCAAGGTACCGAAGCAGAAGAAGTAGGACACCATCTGTATCTCGCAGCCCTCGCTACCGTGCTCGCCGCTATAGCCGTAGCCGTACCCGAAGTCGAAGCCCAGTTCACAGTCGTTCCCCTGTCGAGCCATATAGATCTCGTGCCTCTCCTCGCATGGAGAAGCACAGGTCGTCTTCTCGAAGCCACAGTCCATCACGATCCAAGTCTTCTGTTGAATCAGAGTCTCCACGAAGGGCTAGTGGAGACAGGTCGGGTTCATCATCTCAAAGCCCAGATGGAAAGAAAGGCTTGGTCTCATACGGAGACGGTTCTCCGTATTCAGATCAAAGGTGA 2331 0.4685 MTKKKNPLVFMDVSIDGDPVERMIFELFYDIAPKTAENFRALCTGEKGVSPSTGKPLHYKGSFFHRILKGSIVEGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMAIADRDTLGSHFMITLKADHHHDRKHVVFGKLVQGLNILKKIEDVGDEEGHPTVTVKIINCGEYNEDGKKTNKLTSDTNNHEARRKGKHKKSSRDRRKRRKRYYSSDSESSSESDMESSDSDSDSDSDLSSSSYISSSSDDRRKKRKRSSRKDKYRRRKRRDRRRDKRRRRRDKRSKRRSRRESGSDTDSDSESKSDSSSDGESLDVKGKEQKRKDHSRKNAAEVQSPLAGNKEVPHMHHKKREEVGMLENEEESPKENGERRSNGIGADSRSDRSEERQPDVMDDNPGKSRSRSMSPKRTMSKSMSISPRRSESNSPSASPERKMNRSPSGSRSPCAPSRRSFSRSPARSISRSPSRSISRSPVRGRKGKSVSRSPVRTRSRISDSESPVRSPSRSHRSRSSARISSRRSVSRSPVRVSRKSISKSPVRSSARSLSRSSGRVPSKRGISRSPVRAPSRSNRRSYSRSPSPVHRARSPRGRSLSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSSHRRYSPRRYRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSRSRTRSRSPVHSRSPVEPYRSRASPRMEKHRSSSRSHSPSRSKSSVESESPRRASGDRSGSSSQSPDGKKGLVSYGDGSPYSDQR 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2143 776 MobiDBLite consensus disorder prediction 685 699 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 565 582 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 195 212 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 602 622 - -
Dere05g2143 776 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Dere05g2143 776 MobiDBLite consensus disorder prediction 746 760 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 291 333 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 345 404 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 255 290 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 176 194 - -
Dere05g2143 776 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Dere05g2143 776 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Dere05g2143 776 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Dere05g2143 776 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Dere05g2143 776 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Dere05g2143 776 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 517 557 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 405 473 - -
Dere05g2143 776 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Dere05g2143 776 Gene3D - 1 175 IPR029000 -
Dere05g2143 776 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Dere05g2143 776 MobiDBLite consensus disorder prediction 176 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2143 Dere-ChrDere05 31610903 31616563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2143 25 170 U-box Gene Family AT5G67530 40.541 5.68e-21 95.9