Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2138 ATGCAGGTGCCTAAGAAAATGACGAATCTTTTTGCAAACTCTATGTTTTGCGGTAGGGGGGAGGAGAAGGAGATTGAGATAGAGCAGATGTCCAGGGACGAGGGCAGTCATTACAGCCTCGTCGGTGCCCCTCTTCCGCCTCTTGGTGCCACCGCCTCCCGCGGCCATCGTCGACCCAAGCTCCGATCCTTCATTGTCTCCCCCTTCAATCCTCGTTACAGATCCTGGGAGACATTTCTGGTCCTTCTAGTCTTCTACACTGCATGGGTTTGCCCGTTTGAATTTGGATTCCTTGAGGAACCTAAGGGTCCTCTCGCTATAACAGATAATGTTGTCAACGGGTTTTTTGCCATTGACATTGTTCTGACCTTCTTCGTTGCCTACCTCGACAAAACTTCTTATCTGCTTATCGACAACCCGAAATTAATTGCTTTGAAATATGCCAAAACCTGGTTGACCTTTGATGTCATCTCTACCATCCCTTTTGAACTTGCTCATAACATATTGCCAACTCCTCTTCAGACATACGGATACTTTAACATGCTCCGTCTTTGGCGTATCCGTAGAGTCAGTGCCATATTTGCGAGATTAGAAAAGGATAGGAATTTTAGCTACTTCTGGGTGCGCTGTTCAAAGCTTTTATGTGTTACTCTATTTTCTGTGCATTTTGCTGCCTGCTTTTACTACTTTCTTGCTGCACATCGTGACACAAAAAGTTCATGGCTTGGGCTAGTTTCTAATGGTGATGAGTTGAATCTGAAGGAACGTTATGTAACAGCAACATACTGGGCCATAGTTACTCTTTCAACCGTTGGTTATGGTGATTTGCATCCTGTGAATGCAAAGGAGATGTTGTTTGACATTTTCTATATGCTCTTTAATCTTGGACTTACCTCATATCTGATAGGAAACATGACCAATTTGGTTGTCCATAGTACAAGTCGAACTAGGAAATATAGAGACACTATCAAAGCTGCCACAGGTTTTGCACATCGGAATCAGTTGCCTGTCCGCTTGCAAGAACAGATGCTTGCTCATTTGTCTATGAAGTACAGAACGGATTTAGAAGGACTGCAGCAGCAAGAGATTATTGATTCTCTTCCAAAAGCCATTCAATCTAGCATCTCACACTACCTCTTCTATTCACTTGTTGACAAAGTTTACTTATTTCATGGCGTGTCCAATGACCTACTTTTTCAACTGGTCACGGAAATGAAAGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTCTACAGAATGAAGCACCAACAGACTTTTATATATTGGTTAATGGTGCAGCTGTTGTTGGTGAGGCAAAGACAGGAGATGTAGTTGGAGAGATAGGTGTGCTATGTTACAGGCCACAGTTCTTTACAATTCGAACCAAACGATTGAGCCAACTTCTTCGTCTGAATCGCACTACATTTCTAAATCTTGCTCATTCAAATGTTGGAGACGGGACAATAATCATGAACAATTTTCTTCAGCGTTTGAAGGATTCAAGGGATCCAGTGATGGATGGAGTTTTGGCAGAAACGGAGGCCATGCTAGCTCGGGGCAGAATGGATTTGCCTATCGGTCCATGCTTTGCTGCAAACAGAGACGACGATCTGTTGTTGCATCATTTGCTGAAGAGGGGTTCAGATCCAAATGAAGCAGATAAGAATGGAAGGACGGCACTGCATATTGCAGCATCTAAGGGCAGTGAACATTGTGTTGTTCTGCTTCTAGAATATGGAGCTGATCCCAACTGCAAAGATTTAGATGGAAGTATCCCGCTGTGGGAAGCAATGCTGGGAGGGTATCAATCTGTTGTAAAACTTCTCAAAGACAATGGTGCAGACATATCTTCTGCCGATGTTGGCTATCTTGCTTGCACAGCTGTTGAGCAAAACAACTTGGAATTGCTCAAAGAAATTGTACAACATGGTGGGGATGTGACTCTGCCCAAAAGCAACGGGACCACCGCACTTCACACGGCAGTATGTGAAGGAAACACTGAGATAATAAAGTTTCTTCTTGAACAAGGAGCAGAAACTGATAAGCCAGATGTTCATGGATGGACTCCTGCGGCTTTGGCAGAACATCAAGGACATGAAGAAATCAAGGAGATATTCCAGAACATTCGGCAGGGCAAAAGACCCGTAGCGAATCCAAGGTCAATGAATTATGCGACGTACCTTGGGAGGTTTCAAAGTGAACCAGCAATGTCTGCCCTTTCCGGAGGAAGCATGCCACCACCTGTTCAAGATGTGACTTGGTTGGAGAATCGTCGGAGGCAAAGGGCAAACAATTTTAACAATTCTTTGTTTGGGATCATGTCGGCTGCTGCTAATCGTGGTCAAGCCGATGCATCACAAGACAATGTTGATGTTGCAGAGAACCTGAATGGATTCCCAGCCAGAGTAATTCTGAGTTGTCCAGAAAAAGGAGAACACGCTGGAAAGCTTGTGTTTCTGCCCAAGTCCCTTCAAGAACTGACAGACATGGGTGTGAAGAAGTTTGATTTTTTTGCCACCAAAATTTTGACTAGAGAAGGAGCTGAAGTTGAGGATATAAAGCTTCTAAGAGATGGTGATCATCTCGTTCTTGCACGTGATAGTGCTCATGAGTCATCATGA 2622 0.4397 MQVPKKMTNLFANSMFCGRGEEKEIEIEQMSRDEGSHYSLVGAPLPPLGATASRGHRRPKLRSFIVSPFNPRYRSWETFLVLLVFYTAWVCPFEFGFLEEPKGPLAITDNVVNGFFAIDIVLTFFVAYLDKTSYLLIDNPKLIALKYAKTWLTFDVISTIPFELAHNILPTPLQTYGYFNMLRLWRIRRVSAIFARLEKDRNFSYFWVRCSKLLCVTLFSVHFAACFYYFLAAHRDTKSSWLGLVSNGDELNLKERYVTATYWAIVTLSTVGYGDLHPVNAKEMLFDIFYMLFNLGLTSYLIGNMTNLVVHSTSRTRKYRDTIKAATGFAHRNQLPVRLQEQMLAHLSMKYRTDLEGLQQQEIIDSLPKAIQSSISHYLFYSLVDKVYLFHGVSNDLLFQLVTEMKAEYFPPKEDVILQNEAPTDFYILVNGAAVVGEAKTGDVVGEIGVLCYRPQFFTIRTKRLSQLLRLNRTTFLNLAHSNVGDGTIIMNNFLQRLKDSRDPVMDGVLAETEAMLARGRMDLPIGPCFAANRDDDLLLHHLLKRGSDPNEADKNGRTALHIAASKGSEHCVVLLLEYGADPNCKDLDGSIPLWEAMLGGYQSVVKLLKDNGADISSADVGYLACTAVEQNNLELLKEIVQHGGDVTLPKSNGTTALHTAVCEGNTEIIKFLLEQGAETDKPDVHGWTPAALAEHQGHEEIKEIFQNIRQGKRPVANPRSMNYATYLGRFQSEPAMSALSGGSMPPPVQDVTWLENRRRQRANNFNNSLFGIMSAAANRGQADASQDNVDVAENLNGFPARVILSCPEKGEHAGKLVFLPKSLQELTDMGVKKFDFFATKILTREGAEVEDIKLLRDGDHLVLARDSAHESS 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2138 873 PANTHER POTASSIUM CHANNEL AKT1 35 867 IPR045319 GO:0005249|GO:0006813
Dere05g2138 873 ProSiteProfiles Ankyrin repeat profile. 556 588 IPR002110 GO:0005515
Dere05g2138 873 Gene3D - 527 708 IPR036770 -
Dere05g2138 873 ProSiteProfiles cAMP/cGMP binding motif profile. 389 497 IPR000595 -
Dere05g2138 873 Pfam KHA, dimerisation domain of potassium ion channel 802 864 IPR021789 -
Dere05g2138 873 ProSiteProfiles KHA domain profile. 802 873 IPR021789 -
Dere05g2138 873 Pfam Ion transport protein 74 316 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere05g2138 873 Pfam Cyclic nucleotide-binding domain 409 482 IPR000595 -
Dere05g2138 873 Gene3D - 74 311 - -
Dere05g2138 873 ProSiteProfiles Ankyrin repeat region circular profile. 589 620 - -
Dere05g2138 873 SUPERFAMILY Voltage-gated potassium channels 68 310 - -
Dere05g2138 873 SUPERFAMILY Ankyrin repeat 530 708 IPR036770 -
Dere05g2138 873 ProSiteProfiles Ankyrin repeat region circular profile. 556 587 - -
Dere05g2138 873 FunFam Potassium channel KAT3 75 311 - -
Dere05g2138 873 PRINTS EAG/ELK/ERG potassium channel family signature 86 93 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2138 873 PRINTS EAG/ELK/ERG potassium channel family signature 257 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2138 873 PRINTS EAG/ELK/ERG potassium channel family signature 109 119 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2138 873 PRINTS EAG/ELK/ERG potassium channel family signature 301 310 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2138 873 PRINTS EAG/ELK/ERG potassium channel family signature 283 294 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2138 873 PRINTS EAG/ELK/ERG potassium channel family signature 120 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2138 873 FunFam Potassium channel KAT2 377 502 - -
Dere05g2138 873 Gene3D Jelly Rolls 355 503 IPR014710 -
Dere05g2138 873 Pfam Ankyrin repeats (3 copies) 628 704 IPR002110 GO:0005515
Dere05g2138 873 Pfam Ankyrin repeats (3 copies) 531 619 IPR002110 GO:0005515
Dere05g2138 873 ProSiteProfiles Ankyrin repeat profile. 589 621 IPR002110 GO:0005515
Dere05g2138 873 SMART cnmp_10 389 495 IPR000595 -
Dere05g2138 873 ProSiteProfiles Ankyrin repeat region circular profile. 653 684 - -
Dere05g2138 873 PRINTS Ankyrin repeat signature 605 619 IPR002110 GO:0005515
Dere05g2138 873 PRINTS Ankyrin repeat signature 557 572 IPR002110 GO:0005515
Dere05g2138 873 SMART ANK_2a 620 649 IPR002110 GO:0005515
Dere05g2138 873 SMART ANK_2a 653 682 IPR002110 GO:0005515
Dere05g2138 873 SMART ANK_2a 556 585 IPR002110 GO:0005515
Dere05g2138 873 SMART ANK_2a 589 618 IPR002110 GO:0005515
Dere05g2138 873 CDD CAP_ED 389 483 IPR000595 -
Dere05g2138 873 ProSiteProfiles Ankyrin repeat profile. 653 685 IPR002110 GO:0005515
Dere05g2138 873 SUPERFAMILY cAMP-binding domain-like 314 498 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2138 Dere-ChrDere05 31520807 31526712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2138 21 868 Ion Channels AT4G32500 62.009 0.0 1079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2138 05 31520807 31526712 Dere05g2138 05 31520807 31526712 ECH