Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2137 ATGGGAATCATGGGTACGCCATTCCAGGGCATTATCCTAGATGTCAAAGGAAGTGCTGCATGCTACAAACAAGATTGGATTTGCGCAGTCTGTGCTGGCGTAAAGATATTGGCTCCCACTTTCTACATGTTCTTCGCTTCTGCTCTCCCCGTTATTGCCTTTGGAGAACAACTTAGTAAGCATACAGATGGAAGCTTGAGCACAGTGGAAACATTAGCATCAACTGCTATTTGCGGAATTATCCACTCCATATTTGGTGGACAGCCTTTGTTGATCTTAGGAGTTGCTGAACCCACTGTTATAATGTACGGTTATCTGTATGATTTCAGCAAAAATAGGCCAGAGCTGGGTGCCAAGTTATTTCTGGCTTGGGCTGGTTGGGTCTGTGTCTGGACGGGACTCTTGTTGATTCTGCTTGCAATTTTCAATGCTTGCACAATTATTACTAGATTTACCAGAGTCGCAGGAGAATTATTTGGCATGTTAATTACTGTCCTATTTTTTCAAGAGGCTATAAGGGGACTAATAGGCGAGTTCAGTATTCCCAAAGCTGTAGATCCATCAGCAGAGGAATTTCAATTCCAGTGGCTGTATACAAACGGATTACTTGCAACCATTTTCGCTTTTGGGGTACTTCTCACCGCCATGAAAAGCAGAAGAGCAAGATCGTGGCGATATGGAACAGGATGGCTACGAGGTTTTATTGCTGATTATGGGGTTCCAATGATGGTTGTGTTATGGACTCTGACATCCTATGTTGTACCGAACAAAGTTCCAGATGGAGTTCCTAGAAGGCTGTATTGTCCCCTTCCTTGGGAGTCTGAGTCTCTGTACCACTGGACAGTAGTGAAGGATATGGGGAAGGTACCTGTGTTTTATATTATGGCAGCAATCATTCCTGCTGTGATGATAGCAGGATTATACTTCTTCGATCACAGTGTAGCCTCCCAGATGGCTCAACAGAAGGAGTTTAACCTACAAAAACCATCTGCCTACCACTATGATATGTTATTGCTTGGAATTCTTACTCTGCTTTGTGGTCTTCTGGGACTTCCTCCATCAAATGGAGTCCTTCCTCAATCGCCAATGCATACAAAAAGTTTGGCAGTTCTCAAGAGGCAGTTGATCCGAAAGAAGGTGGTTCAAAGCGCCAAAGAGTGCATCAAGAACCAAAGGAGCAACTCTGAATTATACGGAAAGATGCAGGCAGTGTTCATAGAAATGGATACAGCCCCTACAGACAAGGAGTTGGCGACTCTGAAAGAGGCTGTGATGAAATGTGAGGACAGGGACGGTGAAAAATGCAAATTTGATCCTGAGCAACAGATAGATGCGTATTTACCAGTCCGGGTTAACGAGCAAAGAATGAGCAATGCTTTGCAGTCACTCCTTGTGGGGGCATCAATATTTGGCATCCCCATTATCAAAAGGATCCCTACTTCTGTTCTGTGGGGATATTTTGCTTACATGGCTGTTGACAGTCTCCCAGGGAATCAGTTCTGGGAAAGGATTTTGCTTCTCTTCATCACCCCAGGCCGGCGTTACAAAATTTTGGCAGGTTCTCATGCTTCATTCGTAGAGTTAGTTCCATTCAAGACCATAGCTGCATTCACATTGTTGCAGGTTGCATATTTGGTGATTTGCTGGGGCGTGACATGGATACCTATTGGTGGAATATTGTTTCCGCTACCCTTCTTTCTTCTCATATCCATAAGGGAGCATTTGCTTCCAAAGTTATTCAATCCTAGCCATCTTCAGGAGCTAGACGCTTCTGAGTACGAGGAAATTGCTGGTGATCCACTTGCTTCCCGTAATATATCATTCGCCGATAAGGTTTCACCTGATGCTGATAGTGATACTGATAAGAATTCCGAAGATTTCTATGACGCCGAGATATTGGATGAGATGACAACTAACAGGGGAGAGGTGAAACTCAGAGCTGTTAGTTTCAATGGTAGAAACCACAGCTTCAACGAAGACAGACATTATTAG 1992 0.4398 MGIMGTPFQGIILDVKGSAACYKQDWICAVCAGVKILAPTFYMFFASALPVIAFGEQLSKHTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYGYLYDFSKNRPELGAKLFLAWAGWVCVWTGLLLILLAIFNACTIITRFTRVAGELFGMLITVLFFQEAIRGLIGEFSIPKAVDPSAEEFQFQWLYTNGLLATIFAFGVLLTAMKSRRARSWRYGTGWLRGFIADYGVPMMVVLWTLTSYVVPNKVPDGVPRRLYCPLPWESESLYHWTVVKDMGKVPVFYIMAAIIPAVMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDMLLLGILTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRKKVVQSAKECIKNQRSNSELYGKMQAVFIEMDTAPTDKELATLKEAVMKCEDRDGEKCKFDPEQQIDAYLPVRVNEQRMSNALQSLLVGASIFGIPIIKRIPTSVLWGYFAYMAVDSLPGNQFWERILLLFITPGRRYKILAGSHASFVELVPFKTIAAFTLLQVAYLVICWGVTWIPIGGILFPLPFFLLISIREHLLPKLFNPSHLQELDASEYEEIAGDPLASRNISFADKVSPDADSDTDKNSEDFYDAEILDEMTTNRGEVKLRAVSFNGRNHSFNEDRHY 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2137 663 Gene3D Helical hairpin bin 19 60 - -
Dere05g2137 663 Pfam HCO3- transporter family 200 374 IPR011531 GO:0006820|GO:0016020
Dere05g2137 663 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016020
Dere05g2137 663 Pfam HCO3- transporter family 449 539 IPR011531 GO:0006820|GO:0016020
Dere05g2137 663 PANTHER ANION EXCHANGE PROTEIN 5 597 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2137 Dere-ChrDere05 31489643 31492879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2137 7 649 Antiporters AT4G32510 67.945 0.0 931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2137 05 31489643 31492879 Dere04g0592 04 5911218 5914226 CCT
Dere05g2137 05 31489643 31492879 Dere05g2137 05 31489643 31492879 ECH
Dere04g0592 04 5911218 5914226 Dere05g2137 05 31489643 31492879 ECH