Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2129 ATGGAAAGTGGTGAATTAAGAGTGGCCAGTGCACGTATAGGCAGCTCTAGCATCTGGAGAAGCAGTGCTGCGGATGTATTCTCTGGGTCTTCACGCAGGGACGATGATGAACAAGAGCTCAAATGGGCTGCAATTGAGAAGCTTCCCACGTATCTACGTATGACCAGGGGTATACTCACCGAATCCGAAGGTCAGCCTCAAGAGATTGATATAAACAAACTTGGCCCACTTCAGAGGAAGAATCTGGTAGAGAGGCTAGTGAAGATTGCTGAGGAAGATAATGAAAAGTTCTTGTTGAAGCTCAGAGATCGCATTGATCGAGTGGGGCTTGAGTTTCCAACAATTGAGGTCCGTTTTGAGCATTTAAACGTGGAAGCAGAAGCTCATGTTGGAAGCAGAGCATTGCCCACAATCTTCAACTCCTGTATTAATATGTTAGAGGGTTTCTTGAACTCTTTGCACCTTCTTCCCAGTAGAAAGAAGCCATTCACAGTTCTTCATGATATTAGTGGGATCATCAAGCCTAAAAGAATGACGTTGCTCTTGGGGCCTCCAAGCTCTGGAAAGACCACGTTACTGTTGGCACTGGCTGGAAGACTCGGTAAAGACCTCGAATTTTCTGGGCAAGTTACGTACAATGGGTATGACATGGAGGAGTTTGTACCTCAGAGAACATCAGCGTACATAAGTCAACATGATCTCCATATAGGAGAAATGACAGTGAGAGAAACATTGGCATTTTCAGCAAGGTGTCAGGGGATAGGAAGCCGTTATGAGATGCTGTCAGAGTTATCAAGAAGAGAGAAAGCAGCGAATATCAAGCCAGATCCTGATCTTGATATTTATATGAAGGCGGCAGCACTAGAAGGCCAAGAAACCAATGTGGTCACAGATTATATTATGAAGATTCTGGGGCTAGAAGTTTGTGCTGATATCATGGTAGGAGATGACATGATTCGGGGTATTTCTGGTGGACAAAAGAAGAGAGTTACAACTGGTGAGATGCTAGTTGGACCAGCAAGAGCACTCTTCATGGATGAAATATCAACTGGTTTGGACAGTTCGACCACATTCCAAATGGTGAATTCTTTAAGGCAATCAATCCACATCTTGAATGGAACAGCAGTTGTTTCTCTTCTACAACCAGCACCAGAAACCTATGAACTATTTGATGATATAATTCTCCTTTCTGATGGACAAATCGTCTATCAGGGCCCACGTGAAAATGTGCTTGAGTTCTTTGAATACATGGGCTTCAAATGCCCAGAGAGGAAAGGAGTAGCAGACTTTTTACAAGAAGTAACATCAAGGAAAGATCAAGAACAGTACTGGGCAAATAAAGATGACCCATGTAGCTTTGTCACTGTAAAAGAATTTGCTGATGCATTTCAATCATTTCACATCGGTCGAAAACTTGGTGATGAACTTGCTACTCCATTTGACAAGTCCAAGGGCCACCCTGCTGCTTTGAACAAAAAGAAGTACGGTGTTAATAAGAAGGAGTTGCTAAAAGCTTGCGTATCTAGAGAATGGTTACTCATGAAGAGGAATTCCTTTATCTATATCTTCAAATCACAGCAATTGATTGTAATGGCCTTCATAACAATGACATTATTTCTGCGAACTGAGATGCATCGAGACACAGTAGCAGATGGAGGGATCTATATGGGTGCTCTATTCTTCGTACTCATTATGATTATGTTTAATGGATTTTCGGAACTGTCCATGACCATTATGAAACTCCCTGTGTTCTATAAGCAAAGGGACCTTCTCTTTTATCCTTCTTGGGCATACGCTTTGCCTACGTGGATCCTTAAGATTCCTATTACCTTAGTAGAAGTTGCTATTTGGGTGGTGATGACTTACTATGTTATAGGCTTTGATCCAAACATCGAAAGGTTCTTCAAACAGTTCTTTCTACTCCTTTGCATCAACCAGATGGCATCTGGGCTTTTTCGATTCATGGGGGCAGTTGGTAGGAACTTAATTGTGGCAAACACTTTTGGGTCATTCTCTTTACTAGCAATTATGGTGATGGGTGGATTTATCCTGTCAAAAGATGACGTGAAGAAATGGTGGTTATGGGGTTACTGGTTCTCTCCCATGATGTATGGTCAGAATGCTATAGCTGTGAATGAATTCCTTGGACAGAGTTGGACACATGTTCCTCCTAATTCAACAGAACCACTAGGAGTACAGGTGTTGAAGTCACGTGGGTTTTTCCCTCAAGCATACTGGTATTGGATTGGAGTTGGAGCTTCCCTTGGATATATGTTCTTATTTAATTTCCTTTTCACTTTGGCTCTACACTATCTTGACCCATTTGACAAACCCCAAGCGATAATATCAAAAGAGGACATGGCCGAGAAAAATGCTAGCAGAAACGGACAGGTCATTGAACTGTCGTCCACACAAAAAAGGTCTTCTGAAAAAGGGAATGAAAATCAAAGAAGTGTGTCATCCAGAACACTGTCTGCAAGAGTAGGCAACGTTAGTGAAATAGATCAGAATAGGAGACGTGGGATGGTTCTCCCTTTTACTCCTCTTTCTATCATTTTTGATGAAATCAGATATGCGGTGGACATGCCACAGGAGATGAAGGCACAAGGCATTCTCGAGGATAGACTTGAACTATTGAAGGGTGTTAGTGGAGCATTTAGACCAGGAGTTCTTACCGCACTAATGGGTGTGAGTGGAGCAGGGAAAACAACTTTGATGGACGTGCTGGCTGGACGAAAAACTGCTGGATATATTGAGGGTTCTATAACTATATCAGGCTATCCAAAAAAGCAAGAAACGTTTGCTCGCATATCGGGATATTGTGAACAAAATGACATCCACACTCCTCATGTCACAGTTTACGAATCCTTAGTTTACTCTGCATGGCTTCGCTTACCCCCTGAGGTTGATGCTGCTTCCAGAATGATGTTTGTTGAGGAAGTAATGGAACTGGTGGAGTTGAATTCACTAAGAGATGCACTTGTTGGATTGCCGGGAGTAAATGGTCTGTCCACAGAACAACGCAAGAGGCTAACAATTGCAGTTGAACTTGTAGCCAACCCATCTATTATATTCATGGACGAGCCAACCTCTGGTCTTGATGCTAGAGCAGCAGCTATAGTAATGAGGACAGTGAGGAACACAGTAGACACAGGACGAACTGTGGTTTGTACAATCCATCAACCTAGCATTGATATATTTGATGCGTTTGATGAGCTACTTCTATTAAAAAGGGGAGGCGAAGAAATTTACGTGGGACCTTTAGGCCAACATTGTTCTCATCTTATTAATTACTTCGAGGGAGTTAACGAGGTACTAAAAATTAAAAATGGCTATAATCCTGCCACCTGGATGTTGGAGGTTTCCTCAGAGGCACAAGAAACAGCTCTTCAAGTTAAATTTGCTGAAATATACAAGAACTCTGACCTATACAGGAGAAACAAGGACATGATCAGAGAACTGAGTATAGCTCCACCAGGATTCGTTGTCCCCCGAACTAGGATTCCTGATCCCACCTCCTCCATTCTCTTTTTCTCAAAGGTCGTCTCTATCTCCTTCAACGACCTGTTTTGTGATGCTGACACCTCCACAACTTGA 3597 0.4251 MESGELRVASARIGSSSIWRSSAADVFSGSSRRDDDEQELKWAAIEKLPTYLRMTRGILTESEGQPQEIDINKLGPLQRKNLVERLVKIAEEDNEKFLLKLRDRIDRVGLEFPTIEVRFEHLNVEAEAHVGSRALPTIFNSCINMLEGFLNSLHLLPSRKKPFTVLHDISGIIKPKRMTLLLGPPSSGKTTLLLALAGRLGKDLEFSGQVTYNGYDMEEFVPQRTSAYISQHDLHIGEMTVRETLAFSARCQGIGSRYEMLSELSRREKAANIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLEVCADIMVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMVNSLRQSIHILNGTAVVSLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFEYMGFKCPERKGVADFLQEVTSRKDQEQYWANKDDPCSFVTVKEFADAFQSFHIGRKLGDELATPFDKSKGHPAALNKKKYGVNKKELLKACVSREWLLMKRNSFIYIFKSQQLIVMAFITMTLFLRTEMHRDTVADGGIYMGALFFVLIMIMFNGFSELSMTIMKLPVFYKQRDLLFYPSWAYALPTWILKIPITLVEVAIWVVMTYYVIGFDPNIERFFKQFFLLLCINQMASGLFRFMGAVGRNLIVANTFGSFSLLAIMVMGGFILSKDDVKKWWLWGYWFSPMMYGQNAIAVNEFLGQSWTHVPPNSTEPLGVQVLKSRGFFPQAYWYWIGVGASLGYMFLFNFLFTLALHYLDPFDKPQAIISKEDMAEKNASRNGQVIELSSTQKRSSEKGNENQRSVSSRTLSARVGNVSEIDQNRRRGMVLPFTPLSIIFDEIRYAVDMPQEMKAQGILEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTAGYIEGSITISGYPKKQETFARISGYCEQNDIHTPHVTVYESLVYSAWLRLPPEVDAASRMMFVEEVMELVELNSLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGQHCSHLINYFEGVNEVLKIKNGYNPATWMLEVSSEAQETALQVKFAEIYKNSDLYRRNKDMIRELSIAPPGFVVPRTRIPDPTSSILFFSKVVSISFNDLFCDADTSTT 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2129 1198 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Dere05g2129 1198 MobiDBLite consensus disorder prediction 793 824 - -
Dere05g2129 1198 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 7 1160 - -
Dere05g2129 1198 CDD ABCG_PDR_domain2 848 1086 IPR034003 -
Dere05g2129 1198 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 860 1104 IPR003439 GO:0005524
Dere05g2129 1198 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Dere05g2129 1198 Pfam ABC-2 type transporter 381 433 IPR043926 GO:0140359
Dere05g2129 1198 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Dere05g2129 1198 Pfam Plant PDR ABC transporter associated 719 782 IPR013581 -
Dere05g2129 1198 MobiDBLite consensus disorder prediction 795 824 - -
Dere05g2129 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 875 1091 IPR027417 -
Dere05g2129 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 423 IPR027417 -
Dere05g2129 1198 Pfam ABC-transporter N-terminal 76 140 IPR029481 -
Dere05g2129 1198 Gene3D - 153 458 IPR027417 -
Dere05g2129 1198 SMART AAA_5 175 407 IPR003593 GO:0016887
Dere05g2129 1198 SMART AAA_5 888 1080 IPR003593 GO:0016887
Dere05g2129 1198 Gene3D - 867 1098 IPR027417 -
Dere05g2129 1198 FunFam ABC transporter G family member 34 153 457 - -
Dere05g2129 1198 Pfam ABC transporter 879 1031 IPR003439 GO:0005524
Dere05g2129 1198 FunFam ABC transporter G family member 40 865 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2129 Dere-ChrDere05 31376546 31383376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2129 876 1063 Calmodulin-binding Proteins AT2G36910 25.389 7.74e-06 48.5