Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2115 ATGTTAAGTTATTTCTCTCTAAAGCGGAGGTATGAGCAGAATTATTATGTAAAGAAATCAGGTTGCTCTTCTTCAAGGCATGCAAAAATGAATAAAGGGAGTACAATTTGTGCCAAAGATGAAGAGCGTCCAGTCCGAATCACGCGAGCAAGAGCTAGGGCCTTGGGATCACTCGGAGGGATACCTCCCTGCTCAAGCCCATCCCTTAAACCAGAACAGAGGCGCGTACTTCGAGCAAATTTCAAAAGAGTAGCGTCTGATGAGAACAAAACTTCTGTGGTTGCCCCTGCTGGTCTTCAGCATAAGAGGAGGGCAGTGCTTACGGATGTCACTAACATCAACCAAAAGTCGTATAATAAAATTATTAACTCGTCAAATTTTCAGGCAAGAGAAGATTACATGAAGAAAAACAGAAAACTAGAATCAGATATCTCCATAGATGTTTCGTCAACACAAGAGGATGTTAAAACAAAGTTAGCTGAAGAATTATCCAAAATAAGGATGGTGGAATCACTTGACGCCATTGTCGAAGTAAGGTTGGAAGATAAAGAGCCACCACAACGAGGTGCATCCAATGGCATAAGAGAACGTGCTTTAGCATTTCCTACTCAATCACTGCAGGACTCTGTGAAGTCAAATAAACTCCTGTTGCCTCCAAACGAAGACAAAGATATGATTTGTGAGAAACAAGGAGCTTCAGATGGTCTGGGCATTGTAAACATTGATTCAGAGTTAAAGGATCCTCTAGTTTGGAGTTTATATGCTCCGCTTATATACAATAATATACGTGTCATAGAGCTTGAAAGGAGACCATTGGCCGATTACATGGACAAGTTGCAGCTAGAGATCACTCCAACCATGCGAGCAATTCTAATTGATTGGCTTGTTGAGGTTTCTGAGGGATATAAGCTAGTTCCGGACACTCTTTACCTTACAGTAAATCTTATCGATCGGTTTCTCTCTAAAAGTTTGGTTCAGAAACAAAGGCTCCAGCTGCTTGGGGTCACTTGCATGCTAATTGCATCAAAGTATGAAGAGATCTGTGCTCCTCGACTGGAAGAAATTTGCTTCATCACAGATAATACTTACACAAGAGAAGAGGTATTAAAAATGGAGAATGAGGTTTTAAATACCTTGCATTTTCAGTTATCTGTTCCTACAACCAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATCTTCCTGTAAGGTTCCTTGCGTTGAACTAGCGTTCCTGGCAAATTACTTAGCAGAGCTTACTCTTATTGAATACAGTTTCCTGAAGTTCCAACCTTCCCTGATAGCTGCATCTGCGGTGTTTCTGGCCAGATGGACGCTCAACCAGTCAGAGTACCCATGGAATCCGACTCTGGAGTACTATACAAATTATAAAGCGTCAGAGCTTAGAACTACTGTGCTTGCACTCGAAAATTTGCAGCTTAGTAGCAAAAGTTGTTCCCTGACAGCTATACGTGAAAAATATAAACATCCGAAGTTCAACTGTGTGGCAACGTTGTCTCCAAAATTGGTGCTGTCACTTTTCCAGCTTCATGTGTAA 1560 0.4135 MLSYFSLKRRYEQNYYVKKSGCSSSRHAKMNKGSTICAKDEERPVRITRARARALGSLGGIPPCSSPSLKPEQRRVLRANFKRVASDENKTSVVAPAGLQHKRRAVLTDVTNINQKSYNKIINSSNFQAREDYMKKNRKLESDISIDVSSTQEDVKTKLAEELSKIRMVESLDAIVEVRLEDKEPPQRGASNGIRERALAFPTQSLQDSVKSNKLLLPPNEDKDMICEKQGASDGLGIVNIDSELKDPLVWSLYAPLIYNNIRVIELERRPLADYMDKLQLEITPTMRAILIDWLVEVSEGYKLVPDTLYLTVNLIDRFLSKSLVQKQRLQLLGVTCMLIASKYEEICAPRLEEICFITDNTYTREEVLKMENEVLNTLHFQLSVPTTKTFLRRFIQAAQSSCKVPCVELAFLANYLAELTLIEYSFLKFQPSLIAASAVFLARWTLNQSEYPWNPTLEYYTNYKASELRTTVLALENLQLSSKSCSLTAIREKYKHPKFNCVATLSPKLVLSLFQLHV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2115 519 ProSitePatterns Cyclins signature. 288 319 IPR006671 -
Dere05g2115 519 Gene3D - 258 505 - -
Dere05g2115 519 PIRSF Cyclin_A_B_D_E 66 518 IPR046965 GO:0016538|GO:0044772
Dere05g2115 519 Gene3D - 271 384 - -
Dere05g2115 519 Pfam Cyclin, C-terminal domain 386 508 IPR004367 -
Dere05g2115 519 SUPERFAMILY Cyclin-like 246 383 IPR036915 -
Dere05g2115 519 SUPERFAMILY Cyclin-like 385 508 IPR036915 -
Dere05g2115 519 Pfam Cyclin, N-terminal domain 258 384 IPR006671 -
Dere05g2115 519 FunFam Mitotic cyclin 6 271 371 - -
Dere05g2115 519 SMART Cyclin_C_2 386 509 IPR004367 -
Dere05g2115 519 FunFam Cyclin A1 373 505 - -
Dere05g2115 519 PANTHER CYCLINS 214 497 IPR039361 -
Dere05g2115 519 CDD CYCLIN_AtCycA-like_rpt2 386 500 - -
Dere05g2115 519 SMART cyclin_7 390 478 IPR013763 -
Dere05g2115 519 SMART cyclin_7 293 377 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2115 Dere-ChrDere05 31240291 31245739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2115 23 515 Core Cell Cycle Gene Families AT5G25380 53.036 1.62e-158 456