Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2092 ATGTCAATAACACAAAACAGGGCACCGCTACCACCGCTAGCTAGAAGACGTTCGAGAGGTGAAATCAGGAACTTAGCCTCAGTTTCTAGCAGCCTCTTACCAGCATTTGGCACCAACATTGTTGGTGATGGTCACCTAAACCTGAGAAAATATGTCATCGCTCCCTTTGATCGTAGATACCGGTTGTGGCAGACATTCATTGTAGCATTGGTGGTATACTCTGCATGGGCATCTCCATTCGAGCTAGCTTTCAGAAAAGTAGCAATTGGGTCACTGTTGCCCGTTGATCTAGTCGTCGATGCCTTCTTTGGCATTGATATAATCCTAACTTTCTTTGTAGCTTACTTGGACACCTCAACCTATCTCCTTGTTGATGACCATAAGAAGATAGCCATCAGGTACTTCAAAAATATACAATTTTCCATGGATGTAGCCGCAACTCTGCCATTTCAGCAGATATACCAAATTCTGACGGGCAAAACATACGAGAGCGAGGTTTTTGGTTTCCTAAATATGCTTAGGCTCTGGCGATTAAGGCATGTTAGCCAACTTTTTGCAAGGCTAGAGAAAGACATACGAATTAGCTACTCGGCAACAAGATTTTGTAAACTCATATGTGTTACGTTATTTGCAGTGCACTTCGCAGGCTGCATGTATTACTGGTTGGCTGCCCACTACAAAACACCTTTTGACACATGGATTGGGAGGCAAATACCAGATTTTAAAGACAGGAGCATCTGGCTGGGATACACCTATTCCATGTACTGGTCTATAGTCACCCTTACCACTGTTGGCTACGGAGATTTGCATGCTATCAATACAGGGGAGAAAATTTTCAATATCTTATATATGCTATTTAACATTGGCCTCGCTGCATATATAATTGGAAACATGACAAATCTGGTCGTCCACAGCACTGTCCAAACCTTTGCGATGAGGGACGCCATCAATCAAATAATAAAATATGCAAGCAAAGATAGACTCCCCGAAGGCTTGAAAGAGCAAATGCTGGCACACATGCAATTGAAGTTTAAAACAGCAGAGCTACAGCAAGAAGAAGTGCTACAGAACCTGCCCAAGGCAATTAGATCCAGTATCGCGCAGCATCTTTTCCATAACATAGTTGAAAATGCATATTTATTTAAAGGAGTCTCTGATGATTTTATCACCTACCTGGTGTCAGAAATGAAAGCAGAATACTACCCACCTAAGGTTGACATTATCTTGCAAAATGAGATGCCATTATATTTCTACATTATGGTATCTGGAGCAGCGGATGTCTTAATCAACAATATTGGAACTGAACAGGTAAGAAGAATCCTACGGACAATTTTTTCCTCGAAGCATTTGTTTCAACTGGAATCTGGAGGCATGGCAGGAGAAATAGGAGTTATGTTTAATATCCCCCAACCATTTACAGTGAGATGTAGGAGGCTTTCTCAAGTCATCCGAATTAGTCATGATCATTTCAAGCAGATGGTGCAACCATTTAGTGACGATGGGAAAGCAATTATCACCAACTTCATTCAGGGCTTGAAAAACAAGGCGCTAGAAGAAATTCCTTATCTGACAGAAATGTTGGGTGACCTGCATGTCGAGCATGTAACACAAGAAGAGGGCATACATGACAAAGTTACAAGTTATCATGAAAACGATTCATACAAAGAAGGAAAGAAAGGATATTCTAATCCAATGTCAAGCCCAGTCCCGACCAGAGTAAAAATTTATGGACATCATCCTAAGGAGAATAAAATGGAAAATCAAACCTCACAAAAACTCATACTTCTACCTGATACAATGGAAGAGCTTTTCAGACTAGCAGAGAAGAAGTTTGGAAAAAGAGGAAGCAAGATTCTTATGGCCGATGGATCAGAAGTAGAAAAATTGAGCGTCTTAAGAGAGAATGACGAGTTATATATCTTCTAA 1926 0.4081 MSITQNRAPLPPLARRRSRGEIRNLASVSSSLLPAFGTNIVGDGHLNLRKYVIAPFDRRYRLWQTFIVALVVYSAWASPFELAFRKVAIGSLLPVDLVVDAFFGIDIILTFFVAYLDTSTYLLVDDHKKIAIRYFKNIQFSMDVAATLPFQQIYQILTGKTYESEVFGFLNMLRLWRLRHVSQLFARLEKDIRISYSATRFCKLICVTLFAVHFAGCMYYWLAAHYKTPFDTWIGRQIPDFKDRSIWLGYTYSMYWSIVTLTTVGYGDLHAINTGEKIFNILYMLFNIGLAAYIIGNMTNLVVHSTVQTFAMRDAINQIIKYASKDRLPEGLKEQMLAHMQLKFKTAELQQEEVLQNLPKAIRSSIAQHLFHNIVENAYLFKGVSDDFITYLVSEMKAEYYPPKVDIILQNEMPLYFYIMVSGAADVLINNIGTEQVRRILRTIFSSKHLFQLESGGMAGEIGVMFNIPQPFTVRCRRLSQVIRISHDHFKQMVQPFSDDGKAIITNFIQGLKNKALEEIPYLTEMLGDLHVEHVTQEEGIHDKVTSYHENDSYKEGKKGYSNPMSSPVPTRVKIYGHHPKENKMENQTSQKLILLPDTMEELFRLAEKKFGKRGSKILMADGSEVEKLSVLRENDELYIF 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2092 641 SUPERFAMILY Voltage-gated potassium channels 55 302 - -
Dere05g2092 641 Gene3D - 61 304 - -
Dere05g2092 641 SUPERFAMILY cAMP-binding domain-like 308 509 IPR018490 -
Dere05g2092 641 Pfam Cyclic nucleotide-binding domain 400 495 IPR000595 -
Dere05g2092 641 Gene3D Helix hairpin bin 308 366 - -
Dere05g2092 641 ProSiteProfiles KHA domain profile. 572 641 IPR021789 -
Dere05g2092 641 Pfam KHA, dimerisation domain of potassium ion channel 572 640 IPR021789 -
Dere05g2092 641 Gene3D Jelly Rolls 367 504 IPR014710 -
Dere05g2092 641 PANTHER POTASSIUM CHANNEL AKT1 25 531 IPR045319 GO:0005249|GO:0006813
Dere05g2092 641 SMART cnmp_10 380 509 IPR000595 -
Dere05g2092 641 PRINTS EAG/ELK/ERG potassium channel family signature 276 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2092 641 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2092 641 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2092 641 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2092 641 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g2092 641 CDD CAP_ED 380 505 IPR000595 -
Dere05g2092 641 Pfam Ion transport protein 61 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere05g2092 641 FunFam Potassium channel KAT3 62 304 - -
Dere05g2092 641 ProSiteProfiles cAMP/cGMP binding motif profile. 380 511 IPR000595 -
Dere05g2092 641 FunFam Potassium channel KAT2 368 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2092 Dere-ChrDere05 31048731 31054227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2092 2 641 Ion Channels AT4G32650 57.405 0.0 720