Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2080 ATGGCTGCGTCTTCCAAAATAGCAGCCCCGGCTAAACTCATATACCGCCTTCGAGATATTACTACCCGTACCACCAATTGTTCTTCCTTTTCTCTGATTGTTTCTTCAAGCATCACGCTAAGGACCAAATATAGTACTAGTACTTCCCTGAAGAAGAAGAAGCAGAAGCAGAAGCAGAAATTAGCGGCGGCGGAGAAATCGTCGTCGGCGGTGGGTTTGGTGAAGGAAAAGAGGAGGACACGTTCTGACAAGGAATTTGACAAGGAGGCAATTCAGCGATATGGAGACAACCCCTCTCATATTCCTGTGATGCTCGCTGAAGTACTGGACGTCTTCTCTTCTTCATGTTGTAGACCTTTACACTCTTTTGTCGACTGCACGCTCGGAGCCGGTGGCCATTCCTCTGCTATAATTAATGCTCATCCTGAGTTGAAGCTTTTTGTTGGCATGGATGTGGATCCTGTGGCACATGAGAAGGCTCAAACTCGAATCAATTCCGCCTTGCATTGTGACTCAGACTCTAGTAGCCCTGCTTCTGACCTCAAAGTATATACCATGTTGAAAAACTTTAGACATATCAAGTCTGCACTTAGTGAAATTGGTGAGGAACACTTGGGTCATGGAGTTGATGGCATTTTAATGGACCTGGGAATGTCATCCATGCAGGTGGACAATCCTCAGAGAGGATTCAGCGTGCTCAGTGATGGACCCCTTGATATGCGTATGGATCCTCAGGCAAGTCTTCGAGCTGAAGACATATTGAATTCTTGGCCAGATGCTGAAGTGGGCCGTATCCTGCGGGAGTATGGGGAAGAAAGTAATTGGCGCACTCTGCAATATAAGATTGTCAAAGCCAGATTACATGGTGGATTGCATTCCACTACTGACTTGGTAGATCTTATTAGGCATGTGACTCCTCCAACGAAAGGTGGAAGACAAGGTTGGATAAAGACAGGAACTCGGGTATTTCAAGCTCTGAGAATTGCTGTTAACGATGAACTGAAGACCCTTGAAGATTCCCTAAATTCTTGCTTTGAATGCCTTGCACCCGGAGGTAGGCTTGCAGTCATATCTTTCCACAGTCTGGAGGACAGAATTGTGAAGCAAACGTTTCTTGATATGATTAAAGGGAAGAAAGATGATATAGACGAGAATGAAGTGGATAGCTGCAATAATGATTCGAGAAATATGAAGAGTGGGATTGAAGTAAAAGAAGCATGGATAAGACATCCAATACATGGATCAAATGGAACAATTCTAACAAAAAGGCCAATCACGCCATCAGGAGAGGAAGAAAAATTGAACCGCCGAAGTAGGAGTGCTAAGCTCCGGGTAATTCAGAAGCATTGA 1350 0.4474 MAASSKIAAPAKLIYRLRDITTRTTNCSSFSLIVSSSITLRTKYSTSTSLKKKKQKQKQKLAAAEKSSSAVGLVKEKRRTRSDKEFDKEAIQRYGDNPSHIPVMLAEVLDVFSSSCCRPLHSFVDCTLGAGGHSSAIINAHPELKLFVGMDVDPVAHEKAQTRINSALHCDSDSSSPASDLKVYTMLKNFRHIKSALSEIGEEHLGHGVDGILMDLGMSSMQVDNPQRGFSVLSDGPLDMRMDPQASLRAEDILNSWPDAEVGRILREYGEESNWRTLQYKIVKARLHGGLHSTTDLVDLIRHVTPPTKGGRQGWIKTGTRVFQALRIAVNDELKTLEDSLNSCFECLAPGGRLAVISFHSLEDRIVKQTFLDMIKGKKDDIDENEVDSCNNDSRNMKSGIEVKEAWIRHPIHGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2080 449 Gene3D Putative methyltransferase TM0872, insert domain 226 333 IPR023397 GO:0008168
Dere05g2080 449 Pfam MraW methylase family 99 448 IPR002903 GO:0008168
Dere05g2080 449 SUPERFAMILY Putative methyltransferase TM0872, insert domain 228 331 IPR023397 GO:0008168
Dere05g2080 449 Coils Coil 47 67 - -
Dere05g2080 449 FunFam Ribosomal RNA small subunit methyltransferase H 226 333 - -
Dere05g2080 449 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 100 449 IPR002903 GO:0008168
Dere05g2080 449 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 96 448 IPR002903 GO:0008168
Dere05g2080 449 MobiDBLite consensus disorder prediction 418 449 - -
Dere05g2080 449 Gene3D Vaccinia Virus protein VP39 100 446 IPR029063 -
Dere05g2080 449 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 100 448 IPR029063 -
Dere05g2080 449 NCBIfam 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 97 448 IPR002903 GO:0008168