Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2060 ATGAACTACCTCGTGAACAATAGTGGATTCTCCCCAGAAACTGCATCGGTGCTTTCTAAGCATGCCACTTTCCTGAAATCAGAGACAACAGACGCTGTTCTTAAGCTCTCCAGAAGCCTCAATCTTTCAGATTCTCAGTTGCGCCATACCATCCAGAAGGCACCTTGGCTTCTTTCGAGCGATCCTCTGAAGACCATTTCGTCCAGGCTAGAGTTTTTCAAGTCTAGAGGCGCTTCAAGCTCTGAAATTGTCTTCCTTGGGACCTCTAACCCCTGAATCCTCACTAATTACTTTCTGGTACAGAAAGTTCAGGTATTGCTTGACAATGGAGTGCTCGACTCAGGCGTTGCTCTGCTACTTCGGTTTTGGCCTGAAGTACTCAACGTCCATATATATGAGTTGAAAACCAAGTTAGATGAAGTAAAGGGATTAGGATTTCATCCCTCAAAAACAATTTTCATAGAAGCACTTCGCACCAAAGTATTAGTAGGCAAATCCTCGTGGGAAAGAAAGGTTGAATTGTTTGGGAGGTGGGGTTGGTCAGTTGATACAATACATAAAGCATTTATCAAGCGTCCTTTCTGTATGATGACATCTTGCAGTAAAATTGAGAAAGTGATGCAATTTTTTGTCGACCGCATGGGTTGGGACTCTTTTGTGCTTGCTCAAAATCCAATACTTCTAGGTTATTCTTTGAAGACAAGAATCATCCCCGGGGCATCTGTCTTGCAGTTTCTTCAATCTAGAGATTTCCCAGCCGTTAACTTTATATTTCTTCTTGAGATGAATACGAAGTCTATCTCTGCTACGTTGACAGCCAAAAGAGTAGTTTTTCGTGGAACGTTTGAAATTCTCACCCCCTCTAAACTGTTATAG 876 0.4235 MNYLVNNSGFSPETASVLSKHATFLKSETTDAVLKLSRSLNLSDSQLRHTIQKAPWLLSSDPLKTISSRLEFFKSRGASSSEIVFLGTSNPXILTNYFLVQKVQVLLDNGVLDSGVALLLRFWPEVLNVHIYELKTKLDEVKGLGFHPSKTIFIEALRTKVLVGKSSWERKVELFGRWGWSVDTIHKAFIKRPFCMMTSCSKIEKVMQFFVDRMGWDSFVLAQNPILLGYSLKTRIIPGASVLQFLQSRDFPAVNFIFLLEMNTKSISATLTAKRVVFRGTFEILTPSKLL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2060 291 Pfam mTERF 99 243 IPR003690 GO:0003690|GO:0006355
Dere05g2060 291 Gene3D Transcription termination factor 3, mitochondrial 63 278 IPR038538 -
Dere05g2060 291 SMART mt_12 117 147 IPR003690 GO:0003690|GO:0006355
Dere05g2060 291 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Dere05g2060 291 SMART mt_12 218 252 IPR003690 GO:0003690|GO:0006355
Dere05g2060 291 SMART mt_12 48 79 IPR003690 GO:0003690|GO:0006355
Dere05g2060 291 PANTHER CGI-12 PROTEIN-RELATED 1 105 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2060 Dere-ChrDere05 30693301 30694441 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere05g2060 mTERF 1.1e-12 No_clan