Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2053 ATGGCGGATTCGGTGAATATTAGCAGCGATAGTAGAATTGAGAATTTGATTTCTGTTAAGAAGTCATTGAAGCTTAGCCTAGAGAAATCAAAGTCCCTAGGGTTAGCTTTAGAGAAGGCTGGGCCGCGATTGGAGGAGATTAGCCAAAGATTGCCTTTCCTTGAATCTGCAGTTCGCCCCATTCGCGCTGACAAGGATGCCCTTGTAGCGGCTGGTGGTCACATTAATCGAGCGGTTGGTCCTGCAGCTGCTGTGCTTAAGGTTTTTGATGCCGTTCATGGCCTTGAAAAATCACTCTTATCTGATCCGCGAAACGATCTCCCTGGTTATTTGTCAGTGTTGAAGCGCCTTGAAGAGGCACTGAGTTTCTTGGCAGACAACTGCGGATTGGCTACTCAGTGGTTGGAGGATATAGTGGAGTACTTGGAAGATAATACCGTTGCTGATGAAAGGTTTCTCTCAAATTTGAAGAAGTCACTGCAAAATCTTCGTGAATTGCAAAATGATGAGGAAAAGGCTCGGCTGGATGGTGGGCTTTTAGAAGCAGCTTTGCAAAAACTGGAAGATGAGTTCCGGCGGCTCTTGACTGAAAACAGTGTTCCACTACCAATGTCACTGTCGCCTTCACTTGCTGATCAAGCATGCATTGCTCCTTCGCTTTTACCAGTTTCTGTTATTCACAAGTTGCAAGCAATTCTTGGCAGATTGATTGCTAATAATAGACTCGAGAAGTGCATATCAATTTATGTTGAAGTCCGTAGTTCCAATGTTAGAGCGAGTTTACAGGCTCTTAATTTGGATTACCTTGAGATCTCAGTATCTGAATTCAATGATGTGCAGAGCATCGAGGGATATATAGCCCAATGGGGAAAGCATCTAGAGTTTGCAGTGAAGCATTTGTTTGAGGCCGAGTATAAGCTTTGTAATGATGTGTTTGAGAGGATTGGATTGGATGTGTGGATGGGTTGCTTCTCAAAGATAGCTGCACAGGCTGGTATACTAGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGTAAGAAAGATCCCATAAAACTTTTAAAGTTGTTGGATATATTTGCATCTTTGAATAAATTGAGATTGGACTTCAACCGTCTATTTGGAGGAGCAGCATGTATTGAAATCCAGAACTTGACTAGGGACCTAATCAAGAGTGTGATTGATGGGGCAGCAGAGATTTTCTGGGAGCTTCTGGTTCAGGTAGAGTTACAGAGACAGAACCCCCCTCCCCTTGATGGCAATGTCCCAAGATTGGTGAGTTTCATTACTGATTACTGTAACAAACTCCTAGGGGATGACTATAAGCCAATATTGACACAAGTCCTTGTCATACACCGGAGTTGGAAACGCCAGAGCTTTCAGGAGAAACTCCTAGTTACTGAGGTTATAAATATAATAAAGGCTGTTGAATTGAATTTGGAGACGTGGATCAAGGCTTATGATGATCCTATGCTATCGAACTTCTTTGCTATGAACAACCACTGGCATCTGTACAAGCACTTGAAAGGAACAAAACTTGGGGATCTCTTGGGGGATTCTTGGTTAAGGGAACATGAACAATACAAAGACTATTACTCCACAATCTTCTTGAGGGATAGCTGGGGGAAGCTTCCTGGTCATCTGAGTAGGGAAGGGCTGATTCTGTTCTCAGGAGGGCGTGCTACTGCACGAGATCTGGTCAAGAAAAGGTTAAAGAAATTTAATGAAGTTTTTGATGAGATGTATACAAAGCAATCGGGTTGGGTTATGCCAGAACGAGATCTAAGAGAGAAGACATGTCAGCTTATAGTGCAAGCCGTGGTTCCTGTTTACCGGAGTTACATGCAAAATTATGGTCCCTTGGTGGAGCAAGATGCCAGCTCCACAAAATATGCAAAATACAGTGTGCAGAAGCTAGAGGAAATGCTTTTGTCTCTTTATCAGCCAAAGCCTGTGAGACATGCCAGTTTGAAAGGCCGGCAATTTAGTGCAAAATTTGGCAATGGAATGGTGGATCTTCGTCGGACGGCCTCTGCAGTTGTGTAA 2046 0.434 MADSVNISSDSRIENLISVKKSLKLSLEKSKSLGLALEKAGPRLEEISQRLPFLESAVRPIRADKDALVAAGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALSFLADNCGLATQWLEDIVEYLEDNTVADERFLSNLKKSLQNLRELQNDEEKARLDGGLLEAALQKLEDEFRRLLTENSVPLPMSLSPSLADQACIAPSLLPVSVIHKLQAILGRLIANNRLEKCISIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACIEIQNLTRDLIKSVIDGAAEIFWELLVQVELQRQNPPPLDGNVPRLVSFITDYCNKLLGDDYKPILTQVLVIHRSWKRQSFQEKLLVTEVINIIKAVELNLETWIKAYDDPMLSNFFAMNNHWHLYKHLKGTKLGDLLGDSWLREHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSGWVMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYSVQKLEEMLLSLYQPKPVRHASLKGRQFSAKFGNGMVDLRRTASAVV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2053 681 Coils Coil 153 176 - -
Dere05g2053 681 Gene3D Exocyst complex component Exo70 136 655 - -
Dere05g2053 681 SUPERFAMILY Cullin repeat-like 85 647 IPR016159 -
Dere05g2053 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 81 643 IPR004140 GO:0000145|GO:0006887
Dere05g2053 681 FunFam Exocyst subunit Exo70 family protein 135 653 - -
Dere05g2053 681 Pfam Exo70 exocyst complex subunit 288 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2053 Dere-ChrDere05 30602903 30604948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2053 1 681 EXO70 exocyst subunit family AT4G31540 76.052 0.0 1078