Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2052 ATGGCGGTGGAGCTCATGGGGTTTCCGAAAATGGACGAACAGAAGGCAATCCAGGAGGCTGCATCGGAGGGATTAAAGGGCATGGAGAATCTCATCCGTCTTCTCTCTCATCAACCCAATCTCCTGGAATGCACTGACCTCACCGACGTCACTGTTTCCAAGTTCAAGAAACTCATTTCTCTTCTCAATCGCACAGGCCATGCTCGGTTCAGACGTGCACCGATTCCCTCCTTTTCTTCGCCTTCTCCTTCCACTTCAACATCGCCGCCGCCATCATCCACCGCGCCTTCCTCCCTCAACATTTCCCAAACAAAAATTCCGAATCTATCTCCGGCACAGTTCTTCTCTCCGGCGCCGATCGCAAATCCAGTCACCGTGCATCACGCTCCGATCAACAACAGTACCCCTTCCTCTGGTTTCGGTCCGGTTCAGTCACAGTCTCTGACTCTCGATTTCACAAAGCCTAATATCTTGAGCTCCAACACAAAGTCTCTAGAGCTAGAGTTCTCGAAGGATACCTTCAGCATGTCCTCGAATTCATCGTTCATGTCGTCGGCCATCACCGGCGACGGTAGCGTCTCGAACGGCAAGCAAGGATCGTCGATCTTCCTGACTCCGGCGGCACCAACGGCCTCCGGTAGCGGGAAGCCACCCCTCTCGACGGCGCCGACGAAGAAGAGATGCCACGACCATCGCGAGCACTCCGGCAAACTCTCCGGCTCCAGCAAATGCCACTGCGTGAAGAGAAGGAAGAATCGGATGAAGAAGGTTGTAAGAGTGCCGGCGATTAGTTCGAAGATCGCCGATATTCCACCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGGTCACCGTTTCCACGGGGGTACTACAAGTGCAGCACGGTGAGAGGGTGTCCAGCGAGGAAACACGTGGAGCGGGCCCCCGATGAACCGACGATGCTGATCGTGACGTATGAGGGGGAGCACCGTCACGCTGTGCAGGCCGCGATGCAGGAGAACGTAGATGGGGGGGTGGATTTGGTATTCCAGTCAACGTGA 1053 0.5537 MAVELMGFPKMDEQKAIQEAASEGLKGMENLIRLLSHQPNLLECTDLTDVTVSKFKKLISLLNRTGHARFRRAPIPSFSSPSPSTSTSPPPSSTAPSSLNISQTKIPNLSPAQFFSPAPIANPVTVHHAPINNSTPSSGFGPVQSQSLTLDFTKPNILSSNTKSLELEFSKDTFSMSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTASGSGKPPLSTAPTKKRCHDHREHSGKLSGSSKCHCVKRRKNRMKKVVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTVRGCPARKHVERAPDEPTMLIVTYEGEHRHAVQAAMQENVDGGVDLVFQST 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2052 350 ProSiteProfiles WRKY domain profile. 266 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g2052 350 SMART WRKY_cls 271 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g2052 350 MobiDBLite consensus disorder prediction 207 245 - -
Dere05g2052 350 Gene3D WRKY domain 250 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g2052 350 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 334 IPR044810 GO:0003700
Dere05g2052 350 SUPERFAMILY WRKY DNA-binding domain 269 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g2052 350 MobiDBLite consensus disorder prediction 72 103 - -
Dere05g2052 350 MobiDBLite consensus disorder prediction 223 239 - -
Dere05g2052 350 Pfam WRKY DNA -binding domain 273 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g2052 350 Pfam Plant zinc cluster domain 225 269 IPR018872 -
Dere05g2052 350 FunFam WRKY transcription factor 65 255 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2052 Dere-ChrDere05 30597623 30599140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2052 1 349 WRKY Transcription Factor Family AT2G24570 58.774 3.98e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere05g2052 WRKY 2e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2052 05 30597623 30599140 Dere05g2052 05 30597623 30599140 ECH