Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2034 ATGGCTTACCACGAAGCCTATTATGGGCTTCTCATGCTCTTCTTCATGCTAGCCTTTTGTTTTGTGCCATCATTGGCTGATGACCCACAAGTACTGATGAATTTCAAGGGCTTCTTGTCCAATGCAGGTGCCTTAGACAACTGGGGAAACAACTCTATCAGTCTCTGCAATTGGGCTGGTGTATTATGCCGCCAAGACAAATTTCATGGTTTGAAACTGGAGAACATGGGACTAGGTGGCACAATAGACATAGATACCTTGTTGGAATTGACCAATTTGCAGAGTTTTAGCGTCATTAACAACAACTTTGAGGGTTCAATGCCTGAGTTTAACAAGATTAGGAGGTTAAAGGGTTTGTTTTTGTCCCATAACAATTTCTCTGGAGATATTGCAGACAATGCCTTTCAGGGTTTCAAATACCTGAACAGGTTATTCTTGGCAGAAAATGGGTTCACAGGTCGTATTCCCAATTCCCTTGCTCAATTGCCTAACCTTGTGGATTTGGACTTACACGGGAATCGTTTTGAGGGCAATATACCCGAGTTTCTAAAACATGAGTTCAGAGAATTTAATTTATCGTACAATCAGTTGGAGGGTCCAATACCAGAAAGCTTAAACGTCAATGATCCCAGCTCATATGCCGGCAACAAAGGCCTATGTGGAAAACTTTTGAAGCCCTGCAGCAAGCCCCCCTCCAAGAAGCGCAACACCCTTATAATTGCTATTGTAGTGGTGGCTGTGATTGCCTTGGCTTCAATAATAGCAGTTCTATTTGTCCTTCATCGCAGGAGGCGAAAATCTCAGAGCCAATTGGGTCAAGAATTGCAATCCCAGAACAGTACAAGCTTGGTAAAGGACGCTCCATCAGTTGATCTGACAGCTGAATTCAAGAAGGGTGAAAGTGGAGATTTGAACTTTGTTAAGAAGGACAGAGGGCATTTTGATCTGCAAGACCTGCTTAGAGCCTCAGCTGAAGTTCTGGGTAGTGGTAGTTTTGGATCTACATATAAGGCTATTGTTTTGAATGGGCCAGCCCTGGTTGTGAAGAGATTTAAGCACATGAACAACGTTGGGAAAGAAGAGTTCTTTGAGCACATGAGAAGGCTCGGAAGTTTGAGCCATCCTAATCTTCTTCCTCTTGTTGCATTCTACTATAGAAAGGAAGACAAGCTTCTGGTTTATGACTTCGCTGAAAATGGCAGCTTGGCTAGTCATCTCCATGGTAGGCGTGGTTCCGGGCTAGACTGGCCAACCCGGTTGAAAATCATAAAAGGAGTAGCCAGAGGCTTAGCTTACCTCTACAGAGAATTCCCAGGGACAACCCCCCCTCATGGACATCTCAAATCCTCCAATGTTCTGCTAGACCAGTCAATGGAGCCCTATCTGACAGAATACGGACTCGTCCCAGTGATTGACAAAAGCCACGCTCAACAATTCATGGCAGCATACAAGGCCCCAGAGGTGAACCAATTAGACCGACCCAGCGAGAAGACCGATGTCTGGTGTTTAGGGATTCTCATCCTCGAACTTCTGACGGGAAGATTCCCAGCAAATTACCTACGACATGGAAAAGGCGCAGACTCAGATCTGGCGACGTGGGTGAACTCGGTTGTGAGAGAGGAGTGGACAGGGGAGGTGTTCGATAAGGATATAATGGGAACGAGGAATGGAGAGGGACAGATGCTGAAGCTGTTGAAAATAGGGATGTATTGCTGCGAGTGGAGTGTGGAAAATAGGTGGGACTGGAAGGAGGCGGTGGCGAAGATTGAAGAATTGAAGGAGAAGGATAGTGAAGATGAATTCTCTTCGTTTAACAGTGAAGGGGATTGGTACTCGAGGCCCATGACTGACGAGGATTTCTCTCTCTCAGCCCCCAACTAG 1881 0.4572 MAYHEAYYGLLMLFFMLAFCFVPSLADDPQVLMNFKGFLSNAGALDNWGNNSISLCNWAGVLCRQDKFHGLKLENMGLGGTIDIDTLLELTNLQSFSVINNNFEGSMPEFNKIRRLKGLFLSHNNFSGDIADNAFQGFKYLNRLFLAENGFTGRIPNSLAQLPNLVDLDLHGNRFEGNIPEFLKHEFREFNLSYNQLEGPIPESLNVNDPSSYAGNKGLCGKLLKPCSKPPSKKRNTLIIAIVVVAVIALASIIAVLFVLHRRRRKSQSQLGQELQSQNSTSLVKDAPSVDLTAEFKKGESGDLNFVKKDRGHFDLQDLLRASAEVLGSGSFGSTYKAIVLNGPALVVKRFKHMNNVGKEEFFEHMRRLGSLSHPNLLPLVAFYYRKEDKLLVYDFAENGSLASHLHGRRGSGLDWPTRLKIIKGVARGLAYLYREFPGTTPPHGHLKSSNVLLDQSMEPYLTEYGLVPVIDKSHAQQFMAAYKAPEVNQLDRPSEKTDVWCLGILILELLTGRFPANYLRHGKGADSDLATWVNSVVREEWTGEVFDKDIMGTRNGEGQMLKLLKIGMYCCEWSVENRWDWKEAVAKIEELKEKDSEDEFSSFNSEGDWYSRPMTDEDFSLSAPN 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2034 626 Pfam Leucine rich repeat 114 175 IPR001611 GO:0005515
Dere05g2034 626 Gene3D Ribonuclease Inhibitor 22 134 IPR032675 -
Dere05g2034 626 Gene3D Ribonuclease Inhibitor 135 231 IPR032675 -
Dere05g2034 626 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Dere05g2034 626 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 179 - -
Dere05g2034 626 FunFam Pollen receptor-like kinase 1 397 603 - -
Dere05g2034 626 Gene3D Transferase(Phosphotransferase) domain 1 397 611 - -
Dere05g2034 626 SUPERFAMILY L domain-like 26 206 - -
Dere05g2034 626 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Dere05g2034 626 ProSiteProfiles Protein kinase domain profile. 321 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2034 626 Gene3D Phosphorylase Kinase; domain 1 288 396 - -
Dere05g2034 626 MobiDBLite consensus disorder prediction 595 626 - -
Dere05g2034 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 598 IPR046959 -
Dere05g2034 626 Pfam Protein kinase domain 324 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g2034 626 FunFam pollen receptor-like kinase 1 291 396 - -
Dere05g2034 626 SUPERFAMILY Protein kinase-like (PK-like) 325 592 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2034 Dere-ChrDere05 30370140 30372981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2034 8 622 Receptor kinase-like Gene Family AT4G31250 45.902 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere05g2034 Pkinase 2.5e-27 CL0016