Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2025 ATGTCCATGGATCCAAAGAAGTCTAACAAGATCAGAGAAATTGTTAGGCTTCAACAGATCCTTAAGAAATGGAGAAGGGTAGCCAACTCTTCAAAAACCACCAGCAGTAACAACAACAGCAGCAGCAGCAGTAAGAGCATCAAGTTTCTGAAAAGGACACTATCTTTATCTGAACGTGAAGGAGGATCAAGCAATGTTGTTCCCAAAGGATACCTGGCTGTTTGCGTTGGAGAAGAGCTTAAAAGGTTTATTATACCGACCGAATATCTGGGTCATCAGGCCTTCCACATGTTACTAAGGGAAGCAGAAGAAGAATTTGGGTTTCAACAGACAGGTGTTCTGAGGATCCCTTGTGAAGTGTCGGTGTTTGAGAGTATTTTGAAGATGGTGGAGGGAAAGAAGGATAAGTTTTCCTCCCAAATTTTCCACTCAACAGACAGGTGTCTTGAGGACAAACTTTCTTATTCTCACCATCCTCAGAGTCCAATGTGCAGATAG 498 0.4257 MSMDPKKSNKIREIVRLQQILKKWRRVANSSKTTSSNNNSSSSSKSIKFLKRTLSLSEREGGSSNVVPKGYLAVCVGEELKRFIIPTEYLGHQAFHMLLREAEEEFGFQQTGVLRIPCEVSVFESILKMVEGKKDKFSSQIFHSTDRCLEDKLSYSHHPQSPMCR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2025 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 126 IPR003676 GO:0009733
Dere05g2025 165 Pfam Auxin responsive protein 22 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2025 Dere-ChrDere05 30262811 30263308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2025 3 165 Calmodulin-binding Proteins AT2G24400 57.377 6.84e-60 182