Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1995 ATGTTTGAATACAGAGCCCCGGATCAATTAACTCACTCACTCTCTCTCTCTCCCTTTCTTTCTATCTCCCTCCCAGCTTTGCTCATCGCTGTTCGTTTGCAGATCCTCCTTACAACTGATTGGATCTTCAAATGCGCAACATTTTCGTCGTCTCATCGATTAGTTACATTCAAGTGGGAGTTGGGGTATACTATCTTACTTGTCTGCCAACAAACTATGGAAGGTGACAGGACAACGCCTGCCCCATCGGATGGGCTCAGTGATGGTATCCAGAAGATTAGAGCACTGCATGGGCGGACTAGTGGCCCCACAAGGCGTTCAACCAAAGGACAGTGGACACTTGAAGAGGATGAGATTTTGCGGAAGGCTGTTCAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACGGACGTACAATGCCTACATAGGTGGCAGAAAGTCTTAAATCCTGAACTAGTCAAAGGTCCATGGTCTAAGGAGGAAGATGAAATAATAATTGATTTAGTGAACAAATATGGACCAAAAAAGTGGTCAACTATTGCACAACATTTACCTGGACGTATAGGCAAGCAATGCCGAGAAAGGTGGCATAATCATCTTAATCCTGCTATAAACAAGGAAGCATGGACCCAGGAAGAGGAGCTGGCTCTAGTACGTGCTCATCAGATTTATGGGAACAGATGGGCAGAACTGACAAAATTCTTGCCTGGAAGGACAGACAATGCTATAAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGTTTGCTTACTCAGTACCAAGATGTACCCCTCGTTGGGCAACTAAATCAATCCGTGGTTTCTACCTCTTCAAGGTTGCAGTGTAGTGGAGATGATAATGGTCATAAGGGCACTGAAGGAGGCGAAGTTTCTGAGTGTAGCCAAGAGTCAGCCAATGTTAGCCATTTTCCATCTGCAAGAGAGATGACCCATGTTGTTTTAAGTACTACTGAGGAAATCAAGCCAAATGAAGATTTCAGTCTAGGAAAGGAGCGCAGTCCTAATCAAGCATCCTATTTAGAGCCATATTACGTATCTTTGGATGATGTTACAATATCCATTCCAGACGTTGCTCGTGAAGAGGCTTCCTGTTCTCATTTCATTGAGCAAACATACTCACATGATCCTGGAAATTCTGCAAGCAGGGATGCTCAATTTAACTTGCATGCCCTACCAAATATTTCTTCATCAGACTTGGATCAAGAATCCTCACTTTCGCAAAGGGATAGTGTAGCTTGTGATGAAAGCCAAGACATTGTAAATGTTCCATTTCATACTTCAGCGGGTTTAGGTATTTCAGCATCCATGGGACCCCCTTCTATGGATCCTGCGAAAGCCGACCACATGTTAATATCTAATGAAGAATATTGCAGAGTCCTATATTCAGAGGCAATAAATGATGGATGCTTTTCCTCAGGAGATTATAACAAAGGTGTTGATACGGTTTTGTCCGGATGCACTTCATTTCTTTGCCAATCATCTGACATTCAGATATCTGAGGCTTGTGGAACCTCAAGTGTACACCTAACTTGTCCACCAAGATCTAATAATTTAATAGGATCTTCATGCTCCCAGTCTTTGGTTCTTTCTGCTACTGATGGTAGACTAGTGTATACAGATGAAGCCAATCATTTAGTTGGAGCCGATGATCTACAGTTTGTCTCCAGAGCTCAGGATAGCTTCATTTATGCCAACGATTCATCCATTTCTTCTTGTATTGATGCTATGAATAGCGCAGAAATGCACGTGGGGCCAGATACTGTGAAGGATGCTTCAAGATTGGTCCCTGTTAATACTTTTGAATGTGCATCAGATACCAAGCATACTTGTCATCCAGCGGAAGAAATGACGATTGTGCATACAGAACAGCTGGGCACAGGAGCTCTGTGTTATGATCCGCCTCGTTTTCCAAGTTTGGATATTCCTTTCTTCAGCTGTGATCTTATACAATCTGGAGGGGATATGCAGCAAGAATTTAGTCCCTTGGGCATTCGCCGGCTTATGATGTCTTCTATGAATTGTCCAACTCCCCTGAGGTTGTGGGATTCACCTTCTCGTGATGATAGTCCAGATGCTTTGTTGAAAAGTGCTGCTAAAACTTTCACGGGTACACCATCCATATTAAAGAAACGACACCGAGACATGTTATCGCCTCTATCTGATAAGAGGATCGACAAGAAACTTGAGATTGACTTGACATCCACGTTGGCTACACATTTTTCACGTTTAGACGTCATGTTTGATGACAATGAGACTCGGGAAGCAGATATGCTTCCTCCATCTTCAATCGAGAAAGAGAAATCTGGAACCACTGTTGAGGATAAAGAAAATTGTGGACAATCTATGAGAGGAGAACATGCCGAGGGAAGAAATGAATCTACAATTTTCAGCAACAAAGAGTCTGAAAAAGATACCGGTGATAGTAATTCTCAGGATTTCCAGCGATCTCTTGACGATGATTCGAAGAAGAAGCTTGACGTTGACGTTGATAAAGCTGCTGAGATTGTGCAACAACCTTCTGGAGTCTTAACTGAACATGATATGAATGACTTACTATTGTATTCTCCTAATCAAGTATGTTTAAATCCAGACAAAACTCACTGTTCAAGTATTAAAACTCCAAAAAACCTGAACATCAGAAGCTTGGTAGCAGCTCCAAACAAGAGCATTTCTTCAAATCCATGCTTAAGTGATAGCTCCCCTTCTGTTGGTGTAAAAAATCATGAAATTCCTTCATTTCCAGTTACTTGTGTACAGTCTCATTGTTCGTCGGCCCCGGGGGAGAACTATGGTGATCATCCTGGAAATCATGCTGGCTTTGAAACATTTAGCATATTTGGCGGAACACCTTTTAGAAGAAGCATTGAATCACCCTCAGCATGGAAGTCTCCTTGGTTCATTAACACTTTCTTGCCTAGCCCAAGACTTGATACTGAAATAACAATTGAGGATTTTGGGTATTTCATGAGCCCAGGCGACAGGAGCTATGATGCAATTGGGTTGATGAAGCAAGTCAAGGAACAAACTGCGGCTGCATACGCCAATGCTCAGGAAATTTTGGAAAATGAAACTCCCAAAGCAAAAGAAGCATCTGGGAATGCCAGGGATGTGGACCAGGAAAACAAGGATCCTAATAATCAGCCTGGGAACCATTCACAGTTGCCCTCAAATGCTTTGATAGAGCGACGCATGCTTGACTTCAGTGAATGTGGAACACCAGGGAAGGAGGGTAACGGCATGTCGTCTGCTCTGGCTTCCTCCAGTCCTTCTTCATATTTGTTGAAGGGGTGTAGATAG 3360 0.4265 MFEYRAPDQLTHSLSLSPFLSISLPALLIAVRLQILLTTDWIFKCATFSSSHRLVTFKWELGYTILLVCQQTMEGDRTTPAPSDGLSDGIQKIRALHGRTSGPTRRSTKGQWTLEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALVRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQYQDVPLVGQLNQSVVSTSSRLQCSGDDNGHKGTEGGEVSECSQESANVSHFPSAREMTHVVLSTTEEIKPNEDFSLGKERSPNQASYLEPYYVSLDDVTISIPDVAREEASCSHFIEQTYSHDPGNSASRDAQFNLHALPNISSSDLDQESSLSQRDSVACDESQDIVNVPFHTSAGLGISASMGPPSMDPAKADHMLISNEEYCRVLYSEAINDGCFSSGDYNKGVDTVLSGCTSFLCQSSDIQISEACGTSSVHLTCPPRSNNLIGSSCSQSLVLSATDGRLVYTDEANHLVGADDLQFVSRAQDSFIYANDSSISSCIDAMNSAEMHVGPDTVKDASRLVPVNTFECASDTKHTCHPAEEMTIVHTEQLGTGALCYDPPRFPSLDIPFFSCDLIQSGGDMQQEFSPLGIRRLMMSSMNCPTPLRLWDSPSRDDSPDALLKSAAKTFTGTPSILKKRHRDMLSPLSDKRIDKKLEIDLTSTLATHFSRLDVMFDDNETREADMLPPSSIEKEKSGTTVEDKENCGQSMRGEHAEGRNESTIFSNKESEKDTGDSNSQDFQRSLDDDSKKKLDVDVDKAAEIVQQPSGVLTEHDMNDLLLYSPNQVCLNPDKTHCSSIKTPKNLNIRSLVAAPNKSISSNPCLSDSSPSVGVKNHEIPSFPVTCVQSHCSSAPGENYGDHPGNHAGFETFSIFGGTPFRRSIESPSAWKSPWFINTFLPSPRLDTEITIEDFGYFMSPGDRSYDAIGLMKQVKEQTAAAYANAQEILENETPKAKEASGNARDVDQENKDPNNQPGNHSQLPSNALIERRMLDFSECGTPGKEGNGMSSALASSSPSSYLLKGCR 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1995 1119 Gene3D - 108 160 - -
Dere05g1995 1119 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 211 IPR017930 -
Dere05g1995 1119 CDD SANT 163 207 IPR001005 -
Dere05g1995 1119 ProSiteProfiles Myb-like domain profile. 156 207 IPR001005 -
Dere05g1995 1119 SUPERFAMILY Homeodomain-like 110 165 IPR009057 -
Dere05g1995 1119 Pfam Myb-like DNA-binding domain 161 207 IPR001005 -
Dere05g1995 1119 Pfam Myb-like DNA-binding domain 109 155 IPR001005 -
Dere05g1995 1119 Pfam Myb-like DNA-binding domain 213 255 IPR001005 -
Dere05g1995 1119 MobiDBLite consensus disorder prediction 1100 1119 - -
Dere05g1995 1119 PANTHER MYB PROTEIN-RELATED 109 194 - -
Dere05g1995 1119 SMART sant 108 157 IPR001005 -
Dere05g1995 1119 SMART sant 160 209 IPR001005 -
Dere05g1995 1119 SMART sant 212 260 IPR001005 -
Dere05g1995 1119 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 155 IPR017930 -
Dere05g1995 1119 SUPERFAMILY Homeodomain-like 158 254 IPR009057 -
Dere05g1995 1119 MobiDBLite consensus disorder prediction 1043 1119 - -
Dere05g1995 1119 ProSiteProfiles Myb-like domain profile. 104 155 IPR001005 -
Dere05g1995 1119 MobiDBLite consensus disorder prediction 1064 1078 - -
Dere05g1995 1119 MobiDBLite consensus disorder prediction 772 843 - -
Dere05g1995 1119 CDD SANT 215 255 IPR001005 -
Dere05g1995 1119 FunFam Transcription factor MYB3R-2 214 276 - -
Dere05g1995 1119 MobiDBLite consensus disorder prediction 1043 1063 - -
Dere05g1995 1119 CDD SANT 112 155 IPR001005 -
Dere05g1995 1119 Gene3D - 214 274 - -
Dere05g1995 1119 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 262 IPR017930 -
Dere05g1995 1119 ProSiteProfiles Myb-like domain profile. 208 258 IPR001005 -
Dere05g1995 1119 FunFam Transcriptional activator Myb isoform A 161 213 - -
Dere05g1995 1119 Gene3D - 161 212 - -
Dere05g1995 1119 FunFam Transcriptional activator Myb isoform A 108 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1995 Dere-ChrDere05 29883442 29889894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1995 77 1119 MYB Transcription Factor Family AT4G32730 43.939 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere05g1995 Myb_DNA-binding 3e-14 CL0123